Populus trichocarpa (black cottonwood): 7497419
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Entry
7497419 CDS
T01077
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7497419
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GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Imm63
DUF5928
Motif
Other DBs
NCBI-GeneID:
7497419
NCBI-ProteinID:
XP_002319398
UniProt:
B9I6J6
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Position
13:14747961..14750290
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AA seq
608 aa
AA seq
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MPEEAPMKNLVCEKSRKALQFIEDVTRNADEVQRKVLAEILSRNANVEYLQRYGLNGNKA
DREAFKKVMPVVSYEDLKPDIDRIANGDTSQIICSQPISEFLTSSGTSAGERKLMPTIEE
ELGRRSLLYSLLMPVMNQFVPGLDRGKGMYFLFIKSETKTPGGLLARPVLTSYYKSSYFR
DRPYDPYTNYTSPNETILCQDSYQSMYSQLLCGLYQNYDVLRVGAVFASGFIRAIKFLEK
HWILLCNDIRNGTIDPKISDPSVREAVLKILKPNQKLADFIEAECTRESWKGIITRLWPN
TKYIDVIVTGTMSQYIPTLDYYCDGLPLVCTMYASSECYFGLNLNPLSKPSEVSYTLIPT
MAYFEFLPVNRKNGLINSITAPTSLDQKKDQELVDLVDVKLGEEYELVVTTYAGLYRYRV
GDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAVQNAANHLLPFGASLTEYT
SYADTSKIPGHYVLFWEICLSGTTPIPPSVFEDCCLAIEESLNSVYRQGRVSDKSIGPLE
IRITERGAFDKLMDFALSQGASINQYKAPRCVKYAPIIELLNSRVVSNYISPKCPKWVPG
HKQWCTPN
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaagctcctatgaaaaacttggtttgtgaaaaaagtagaaaggctttacag
tttattgaagatgttacacgtaatgctgatgaggtgcaaagaaaggttcttgctgaaatc
ctctctaggaatgcaaatgttgagtatttgcagagatatggcctgaatgggaacaaagca
gacagagaagctttcaagaaagtgatgcctgttgtcagttatgaggatctgaagccagat
attgatcgtattgctaatggagatacttctcaaatcatatgttcccaacccatttcagag
ttcttgacaagttctggtacatctgctggagaaaggaaactgatgccaacaattgaggaa
gagctgggaagaagatcattgctatatagcctattgatgccagtgatgaatcaatttgtt
ccaggtttggatagaggaaaagggatgtactttttgttcataaaatcagaaactaagact
cctggaggattattggcacgtccagttttaactagctattacaaaagttcatacttcaga
gataggccttatgatccatacacgaactatactagcccaaatgaaaccattctctgccag
gattcttaccagagtatgtactctcaattgctttgtggcctttaccaaaactatgatgtt
cttcgagtcggtgcagtctttgcttctgggttcattagggcaattaagttccttgaaaaa
cattggattttgctttgcaatgatatccggaatggaacaattgaccccaaaataagtgac
ccttcagtaagagaggctgttttgaaaattctcaaacccaaccagaaactagctgatttt
attgaggctgaatgtaccagagagtcgtggaaagggatcataactaggttgtggcctaac
accaagtatattgatgttattgtcacagggacaatgtcacagtatattcctacacttgac
tattactgtgatggcctccccctagtttgcaccatgtatgcttcttctgaatgctacttt
ggccttaacctgaatcctttgtctaagccaagtgaagtttcttacaccctcatcccaacc
atggcctactttgagttcttgcccgtgaacagaaagaatggacttataaattcaatcact
gcaccgacatcccttgatcagaagaaagaccaggaattggttgatcttgttgatgtcaaa
ctaggtgaagaatatgagcttgttgtcaccacctatgcaggtctttatcggtatcgagtg
ggggacatacttcgtgtggctggattcaagaacaaggctcctcaattcaactttgtatgt
agaaagaatgttgttctcagcattgattctgataagactgacgaagttgagctgcaaaat
gcagtgcagaatgcagctaaccatcttttaccattcggtgcatctctcacagaatataca
agctatgctgatacatcaaagatacctggccactatgtattattctgggagatctgcctt
agtggaacaactcctattcctccttcagtttttgaagactgttgccttgctattgaagaa
tcactcaacagtgtttatcgccaaggccgagtctcagataagtccattggccctctagag
ataaggataactgagaggggggcatttgacaagcttatggacttcgctttaagccaaggt
gcatcaataaatcagtacaaggctccaaggtgtgttaaatacgcaccgattatcgagctt
ctcaactcaagggttgtgtcaaattacatcagtccaaaatgcccgaaatgggttcctggt
cataagcaatggtgcactccaaactga
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