Populus trichocarpa (black cottonwood): 7497510
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Entry
7497510 CDS
T01077
Name
(RefSeq) plant UBX domain-containing protein 10
KO
K18726
FAS-associated factor 2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7497510
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
7497510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBX
UBA_4
UBA_8
FAF1
TAP_C
Motif
Other DBs
NCBI-GeneID:
7497510
NCBI-ProteinID:
XP_002303682
UniProt:
B9GXV5
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Position
3:16021477..16024593
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AA seq
474 aa
AA seq
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MVDVADKLAYFQAITGLEDPDLCTQILQAHNWDLELAISSFTSNHNNDPLSYSSSTATAT
TSTVVEPPISSIHRSDSTAIAPVAPPPPGLGWKIITLPISIVSGSLRLISGAVGFGFWAA
GSIFSYSLGFIGFSSNSGRGGDSSAQLVTVSAASREALEFIAQFERDYGGSGSSSRPNFV
GEGFMDALTRSRNSFKLLFVYLHSPDHPDTPAFCEGTLCSEVFSAFVNENFVAWGGSLRG
SEGFKMSNSLKASRFPFCAVVMPATNQRIALLQQVEGPKSPEEMLMTLQRVLEESAPVLV
AARLEAEERTTNMRLREEQDAAYRAALEADQARERQLREEQERLEREAAEAERKRKEEEE
AQERATREAAEKEAALARMRQEKALSLGAEPEKGPNVTQVLVRFPTGERKERRFHSTATI
QSLYDYVDSLGCLDVENYSLVSNFPRVVYGTDKVSLSLKEAGLHPQASLFVELN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggttgatgtagcagataaattagcgtattttcaagcaattacaggccttgaagatccc
gatttatgcacccagatcctccaagcccataattgggacctcgaactcgccatctcctct
ttcacctctaatcacaataatgaccccctttcttactcctcatccaccgccaccgccacc
acatccaccgtcgtcgaaccacccatttcatccattcatcgttccgattccaccgccatc
gctcccgtggctcctcctcctcctggtttgggctggaaaataattactttaccaatctca
atcgtttctggtagtttacggttaatttctggtgctgttgggtttggattttgggctgct
ggtagtatcttctcttattcattaggttttattgggtttagctcgaattcgggccggggt
ggggattcttcggcccaattggtaactgtttccgccgcgtcgagagaagccttggagttt
attgctcaatttgagagggattatggtggttctggttcttctagtaggccgaattttgtt
ggtgaaggatttatggatgcgttgacgaggtcgaggaatagttttaagttgttgtttgtg
tatttgcattccccggatcatcctgatacgccggcgttttgtgaggggacgttgtgttcg
gaggtttttagcgcgtttgttaatgagaattttgttgcgtggggtgggagtcttagaggg
agtgaggggtttaagatgagtaatagtttgaaggcttcaaggtttccgttttgtgctgtt
gttatgcctgctacaaatcagaggattgcgttgcttcaacaggttgagggtccaaaatct
cctgaagaaatgctcatgacactacagagagttcttgaagaaagtgccccggttcttgtt
gcagcaagacttgaagcggaggagagaacaacaaacatgcgtttgagggaggagcaagat
gctgcatacagagcagcacttgaagccgatcaagctagggaacgacaactgagagaagaa
caagaacgtctggaaagggaggctgctgaggcagagagaaagcgcaaggaggaagaagag
gctcaggagagagcaacacgtgaggctgcagaaaaagaggcggctctggcaagaatgcgg
caggagaaagccttgtcgcttggtgctgaacctgaaaagggacctaatgttacacaagtt
ttggttcgatttccaacgggagaacgcaaagagaggagattccacagtacagccactatc
cagtccctgtatgattatgttgattctttgggttgcttagatgttgagaattacagtctt
gtctcaaactttccccgagttgtctatggtacagataaggtctctctatctttaaaagaa
gcaggtttgcaccctcaagccagcctttttgtggagctgaactag
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