Populus trichocarpa (black cottonwood): 7497596
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Entry
7497596 CDS
T01077
Name
(RefSeq) myosin-17
KO
K10357
myosin V
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
7497596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7497596
04131 Membrane trafficking [BR:
pop04131
]
7497596
03029 Mitochondrial biogenesis [BR:
pop03029
]
7497596
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7497596
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
7497596
mRNA cycle factors
P-body specific factors
7497596
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Myosins
7497596
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
7497596
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
7497596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
nSTAND3
APS_kinase
CbiA
AAA_18
TSC22
Motif
Other DBs
NCBI-GeneID:
7497596
NCBI-ProteinID:
XP_024459210
LinkDB
All DBs
Position
6:complement(12362083..12375399)
Genome browser
AA seq
1530 aa
AA seq
DB search
MATTDNIIVGSHVWVEDPVLAWIDGEVLRINGEQVHVQATNGKTVVANISKVFPKDTEAP
PGGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQY
KGAAFGELSPHVFAVADVAYRQMINEGKSNSILVSGESGAGKTETTKMLMRYLAYMGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLE
RSRVCQVSDPERNYHCFYLLCAAPLEERERYKLENPKSFHYLNQTNCYKLDGVNDAEEYL
ATRRAMDIVGISEEEQEAIFRVVAAILHLGNIEFAKGEEIDSSVIKDQKSRFHLNMTAEL
LKCDAKSLEDALIQRVMVTPEEVITRTLDPLAAVLSRDALAKTIYSRLFDWLVDKINNSI
GQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKL
SRTSFTISHYAGEVMYLADQFLDKNKDYVVAEHQDLLTASKCPFAASLFPPLPEESSKSS
KFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNLLKPAIFENANIIQQLRCGGVLEAI
RISCAGYPTRRTFYEFLLRFGVLAPEVLEGNHDDKVACQMILDKMGLKGYQLGKTKVFLR
AGQMAELDARRTEVLGNAARTIQRQIRTYIARKEFISLRRAAFHLQSHCRGVSARMLYEG
LRQEAAALKIQKNFRRHTARKAYLTLCLSAISLQTGLRAMTARNEFRFRKQTKAAIIIQA
KLRHHIAYSYYKRLQKAALVSQCGWRQRVARRELRKLKMAAKETGALKEAKDKLEKRVEE
LTWRLQLEKRLRADLEEEKAQEIAKLQDALREMQIQVEDANARVIKEREEAQKAIEEAPP
IIKETPVIVQDTEKVESLTAEVESLKALLLSERQAAEEARKAHADGEARNSELAKKLEDA
AKKMDQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKSLSARPKSMIIQRTPVNGNV
ANGEVKVASDIILAASNAREPESEEKPQKSLNEKQQENQDLLIKCVSQNLGFSGGKPVAA
CVIYKCLLHWRSFEVERTTVFDRIIQTIASSIEVPDNNDVLAYWLSNSSTLLLLLQHTLK
ASGAASLTPQRRRTSSASLFGRMSQGLRASPQSSGLSFLNSRGLSRLDDLRQVEAKYPAL
LFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIA
HWQSIVKSLNSYLKTMKANNVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYV
KAGLAELEQWCYEATEEFAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKELCPVLSIQ
QLYRISTMYWDDKYGTHSVSSDVISSMRVMMTEDSNNAVSNSFLLDDDSSIPFSVDDISK
SMQQVDIADIDPPSIIRENSGFGFLLPRSE
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggctacaacagataacattatagtaggttctcatgtatgggttgaagaccctgttttg
gcatggattgatggagaagttctcaggatcaacggtgaacaagttcatgttcaagccact
aatgggaaaacagttgttgcaaatatctccaaagtatttccaaaggataccgaagctcct
cctggaggtgtagatgacatgacaaagctgtcatacttgcatgaaccaggagttctgcat
aacttggctgcaagatatgaacttaatgaaatatatacatacactggaaatatactgatt
gcaataaatccattccaaagattaccacatctgtatgatacgcacatgatggaacaatat
aaaggtgctgcatttggagagctaagccctcatgtttttgcagttgcagatgttgcatac
aggcaaatgatcaatgagggaaagagtaactcgattctagttagtggagaaagtggtgct
ggtaagactgagacaacaaagatgcttatgcggtatcttgcatacatgggtggtcgatca
ggcgtggaagggcgaactgttgaacaacaagtgctagaatctaatccagttcttgaagca
tttggtaatgccaaaactgttaggaacaacaactccagtcgatttggtaaatttgttgag
attcaatttgacaagaatgggaggatatcaggagcagctatacgtacttatttacttgaa
agatctcgtgtttgccaagtttctgaccctgaaagaaactatcactgtttttaccttctg
tgtgctgcaccgctggaggaaagagagaggtataagttggaaaaccccaaatcattccat
tacctgaatcagaccaactgctataagttagatggagtaaatgatgctgaggaatatctt
gccaccagaagggcaatggatatagttggcattagtgaggaagagcaggaggcgattttt
agggttgtagctgccattctgcatcttgggaacattgaatttgcaaaaggagaggaaata
gactcatctgttatcaaggaccagaaatctaggttccatctcaacatgacagcagaacta
ctaaagtgtgatgccaagagcttggaagatgcattgatacagcgtgtgatggtaacacct
gaagaggttattacaagaactctcgatcctcttgctgcggttcttagcagggatgcctta
gctaaaaccatttattcccgcttatttgattggcttgtggataaaattaacaattctatt
gggcaagatccaaactcaaaatcgttgattggagttcttgatatatatggttttgaaagt
ttcaagttcaatagttttgagcagttctgtatcaactttacaaatgaaaaacttcaacag
catttcaatcagcatgtatttaaaatggaacaagaagaatatacaaaagaagaaatcaac
tggagctacatagaatttgttgataaccaagatgtgttggatctgattgagaagaaacct
gggggtatcatagcacttcttgatgaagcctgcatgtttcctaaatctacacatgaaaca
tttgctcagaaattgtaccagacatttaaaaacaacaagcgcttcatcaagcctaagctt
tctcgtactagctttaccatatctcactatgcaggggaggtgatgtatttggctgatcag
ttcctagacaaaaacaaagattatgtagtggcagaacatcaggatcttttgacagcttcc
aaatgcccttttgcagctagcctatttcctccacttccagaggaatcttcaaagtcatct
aaattttcttccattgggtcacgttttaagctacaactccaatctttgatggagaccttg
aattctacagagcctcactatatcagatgtgtgaagccaaacaatttactaaagcctgca
atatttgagaatgctaatattatccagcaactacgctgtggtggtgttcttgaggcaatt
aggattagctgtgctgggtatcctacaaggcggacattttatgagtttcttctccgtttt
ggtgttcttgctccagaagttttggaaggaaaccatgatgacaaggttgcttgccaaatg
attttggataaaatgggattgaaaggttatcagctaggcaagacaaaagtctttctcaga
gcaggtcagatggctgaactggatgcaagaagaacagaggtacttggaaacgcagctaga
accatacaaaggcaaatccgcacgtatattgcacgcaaagagttcatttcattgcgtcgg
gctgccttccatttacaatctcattgccgaggtgtatcggcccgcatgctatacgagggg
ttgcggcaagaagcagcagctttaaaaattcagaagaatttcaggcgacacactgccagg
aaagcctacttgactctatgtttgtcagcgatctctttgcagacaggcttaagggcaatg
actgctcgcaatgaattccgattcagaaagcaaactaaagctgcgattattatccaggca
aaattgcgtcaccacatagcatattcttattacaagagacttcagaaggctgcattagtt
tctcaatgtggttggaggcaaagggttgcccgtagagagcttaggaagctcaaaatggct
gcaaaggaaacaggggcccttaaagaagcaaaagacaaattagaaaagcgtgtagaagaa
ttaacatggcgattgcagttagagaagagattgagggctgatctggaagaggaaaaggca
caagaaattgccaagttacaagatgctttgcgtgagatgcaaatccaagttgaagatgca
aatgccagagtaatcaaagaacgagaggaagctcagaaagcaattgaagaagcacctcca
attattaaggagacccctgtaatagttcaagacacagaaaaggttgaatcattaacagct
gaggtagaaagtttgaaggctttgctgctctcagaaagacaggcagcagaagaggcaagg
aaagctcatgcagatggtgaggctagaaactcagaattggctaagaaactagaagacgca
gcgaaaaaaatggatcagcttcaggaatcagtccagaggctggaggagaaactttccaac
tcagagtcagagaatcaagtgcttcgtcaacaggcactgactatgtcaccaacagggaaa
tctttgtctgcacgaccaaaatcaatgattatccagaggactcctgtgaatgggaatgtt
gcaaatggagaggtgaaggtggcatcggacataattcttgctgcatcaaatgctcgtgaa
ccagaatctgaggaaaaaccacagaaatctctcaatgaaaagcagcaggagaaccaggac
ctgctgatcaaatgtgtatcacagaacttgggattctccggggggaaaccagttgcagcc
tgtgtcatatacaaatgtcttcttcactggaggtcatttgaagttgaaaggacaactgtt
tttgatcgtatcattcagacaatagcttcttccattgaggtccctgataacaatgatgtc
ttagcctactggttatctaattcatccacattgctgctgctgctgcaacacacactcaaa
gcaagtggtgctgctagcttgacaccacaaagacggagaacatcatctgcttctcttttt
gggagaatgtctcaagggctaagggcatctcctcagagttctggactttcatttcttaac
agtcgggggcttagtagactggatgacttgcgacaggttgaggctaagtatccagcatta
cttttcaagcagcaacttacagccttccttgagaagatatatggaatgatacgagacaat
ctgaagaaagaaatctccccactgcttgggttatgcattcaggcaccaaggacttccagg
gcaagtttagtgaaaggtcgctctcaagctaatgctgttgctcagcaagctttaattgct
cattggcaaagcatcgtcaaaagcttaaatagctacttgaagacaatgaaagcgaacaat
gtacctcccttcttagtgcgtaaagtgttcactcaaatattctctttcatcaatgttcag
ttgttcaacagtcttcttttacggcgcgagtgttgctcattcagtaatggagaatatgta
aaagctggtttggctgaattagaacagtggtgctatgaggcaactgaggaatttgcaggc
tcagcttgggatgaattaaagcatataagacaggctgttggattcctagtcatacatcaa
aagcccaaaaagaccttgaatgaaataacaaaagagctttgcccggtgctgagcatacag
cagctgtacaggatcagtaccatgtactgggatgataaatatggcacccatagcgtgtct
tcagatgttatatctagtatgagagttatgatgacagaggattcgaacaatgctgttagc
aattcttttcttttggacgatgattcaagcatcccattttctgtggatgacatctccaag
tcaatgcaacaagtagacatagctgacatcgatcctccttcaataattcgtgaaaactct
ggtttcgggttcttgcttccacgctctgagtga
DBGET
integrated database retrieval system
