Populus trichocarpa (black cottonwood): 7497755
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Entry
7497755 CDS
T01077
Name
(RefSeq) YTH domain-containing protein ECT4 isoform X2
KO
K20102
YTH domain-containing family protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7497755
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
7497755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
DUF3942
Motif
Other DBs
NCBI-GeneID:
7497755
NCBI-ProteinID:
XP_002310346
UniProt:
B9HG69
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Position
7:complement(191834..197036)
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AA seq
656 aa
AA seq
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MAATQSPSQPAPDRVPAEEKPAESDNMKEQPLSAKNETSVSPNSSQDTAPSGHPRDTTGQ
LGAFGSPGDRAVYPPNIYAPQAQAFYYRGYDNVTGEWDEYPPYINAEGLEIGSPGVYNDN
PSLVFHAGYGYSPQMPYGPYSPVTTPLPSVGGDAQLYSPQQFPFSGPPYYQHLGPNMSYI
TSPTPVSQPEFNALANIDQQGDNMLFGPRPSYPPPVGSIGRGSFPGNHGFHDQQQGFDGL
RSGGLWSDWSKPSDRNRPLTPFSPSVSPQPIGNFVSFGQNVGMASQQQRSFYGPGSGSNS
YNRAYLQSGYNQGSSFGSASISSLGTNNRGWLSLENNRRRGRSNVSLCGCNGSLDILSEQ
NRGPRALKPKAQNTAEHGPSVENNKHSKPSAKIHDESYNQPDFVIEYKDAKFFIIKSYSE
DNVHKSIKYGVWASTPNGNRKLDTTYREAKEKQDPCPVFLLFSVNASAQFCGVAEMTGPV
DFDKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQG
IEMLNIFKNYETDMSIIDDFDFYEDRQKAMQERKARQQASLMAVGVVGESEHRNAVTLPT
DIIKQMTKSFAQVVCLDESSKEGTVTDRVSSGSDGSAGARVKLEDGITTVSPSQTS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacccaatcaccatcacaacctgctccagatcgtgtccctgctgaagagaaa
cctgccgaatcagataacatgaaggagcagcctctatcagcaaaaaatgagacgtcagtt
tctcctaattcctcacaggatactgccccttcaggtcatcctagggacaccacaggtcaa
ttgggagcatttggttctcctggagatcgtgctgtctatccacctaatatttatgctcct
caggcacaggcgttctactacagaggttatgacaatgtcactggtgaatgggatgaatat
cctccatatataaatgctgaaggtttagaaattgggtctcctggtgtctacaatgacaat
ccttctcttgttttccatgctggatatggatatagtccacaaatgccttatgggccatat
tctccagtcaccactcctttaccttctgtcggtggagatgcacagttatactcccctcag
caatttccattttctgggccaccttattaccagcatctaggtcctaacatgtcatatatc
acttcaccaacaccagtttcacaaccggagttcaacgcattggcaaacatcgaccaacaa
ggagataacatgcttttcggaccaaggcctagttatcctcctccagtaggatcaattggt
aggggcagctttccaggaaaccatggttttcatgatcagcagcaggggttcgacggattg
agatctggaggactttggtcagattggtcaaagccctcagatagaaataggcctttgact
cccttttcaccttcagtttccccacagcctattggcaattttgtgtcatttgggcagaat
gttggaatggcatctcaacaacaaagatcattttatggccctggatctggttcaaactcc
tacaatagagcctatctgcagagtggttacaatcagggatctagttttggaagtgcatcc
atttctagtttggggactaacaatcggggttggctttctcttgaaaacaacagacggcga
ggaaggagcaatgtttccttatgtggctgcaatggtagtcttgatatccttagtgagcaa
aacagaggaccaagggccttaaagcctaaggcccaaaatacagctgaacatggtccttct
gttgagaataataaacatagcaaaccatctgccaagatccatgacgaatcatacaaccaa
ccagattttgtaattgaatacaaggatgctaagttcttcatcatcaagtcatacagtgaa
gataacgttcacaagagcatcaaatatggtgtttgggccagcactccaaatgggaataga
aaattggacaccacctatcgtgaagctaaggagaagcaagatccttgtcctgtgtttctc
ttattttcggtgaatgctagtgcccagttttgtggagtggctgaaatgactggacctgtt
gactttgacaagagtgtggattactggcagcaggacaagtggagcgggcagttccctgtc
aaatggcacattattaaagatgtcccaaacagtcagtttcgtcacattgtattggaaaat
aatgacaacaagcctgtcactaacagtcgagacacacaggaggtgaaattggagcagggc
attgagatgttgaacatctttaagaattacgaaactgatatgtcaatcatagatgatttt
gatttttatgaggaccgacagaaagccatgcaagaaaggaaggctagacagcaagccagc
ctgatggctgtaggtgtagttggagaaagtgagcacagaaatgcagttaccttaccaact
gatattatcaagcagatgacgaagagttttgctcaagttgtctgcctggatgagtctagc
aaagaaggcactgttactgatagggttagttctggctctgatggttctgcgggcgctaga
gttaaattggaagatggtatcacaaccgtctccccctcgcagaccagttag
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