KEGG   Populus trichocarpa (black cottonwood): 7497834
Entry
7497834           CDS       T01077                                 
Name
(RefSeq) high mobility group B protein 13
  KO
K09273  upstream-binding transcription factor
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pop03000]
    7497834
   03021 Transcription machinery [BR:pop03021]
    7497834
Transcription factors [BR:pop03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   UBF
    7497834
Transcription machinery [BR:pop03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    UBF
     7497834
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 CHDNT HMG_box_5
Other DBs
NCBI-GeneID: 7497834
NCBI-ProteinID: XP_024452864
LinkDB
Position
3:15499275..15501984
AA seq 505 aa
MADTAVASTVPKKSRNNRKALKQKNPSTNESNIMAQKLSETSTATVLSPSDADPSKENHA
SHSQPRSSPKKGKSKAAKAKQNKEASASLFEKDFQEMQEMLQQLKLEKEKTEVLLKEKDD
MLKAKDEEIEMKGKEQQKMKMELKKLQKLKEFKPTMTLSFVQAMNDKQQDKKKKKGGNEI
KRPCPPYSLWCKAQWNEVKKENPDAEFKDISNILGAKWKTITAEEKKPYEEKYQAEKEAY
LKVMTKEKRESEAMKLLEEEQKQKTAMELLEQYLQFKQEADQEENSKKTKKEKDPLKPKQ
PLSAFFLFCNERRAALLAENKSVLEVAKIAGEEWKNMTEKRRGPYEEVAKKNREKYMQEM
EAYKQTKDEEAMNLKKEEEELVKVQKQEAWQLLKKKEKTENIIKKTKEQRQKKQQQNVDP
NKPKKPASSFLLFSKETRKSLMDERPGINNSTLTAMISVKWKELNEEERQIWNSKAAEAM
EAYKKELEEYSKSLAAATSNDKQQQ
NT seq 1518 nt   +upstreamnt  +downstreamnt
atggcagataccgctgtagcctcgacagttccaaaaaaatcaagaaacaacaggaaagct
ttgaaacagaagaacccatcaacaaatgaatccaatataatggctcaaaagctctctgag
acatctactgccaccgttttatctccatcggatgctgatccttcaaaagaaaaccatgcg
agtcattctcaacctcggtcttcacccaagaaagggaaatccaaggccgcgaaagcgaag
cagaataaagaggcttcggcttctttgtttgagaaagattttcaagaaatgcaagaaatg
ttgcagcagttaaagcttgagaaagaaaagaccgaggttttgttgaaggagaaagatgac
atgttgaaggctaaagatgaggagattgaaatgaaaggtaaagaacagcagaagatgaag
atggagttgaagaagttgcagaagttgaaggaattcaagcccaccatgactctctcattt
gttcaagcaatgaatgacaagcagcaagacaagaagaaaaagaagggtggcaatgaaatc
aaaaggccatgcccaccttactcactttggtgcaaagctcaatggaatgaggtaaaaaaa
gaaaacccagatgcagagtttaaggatatctctaacattttgggggcaaagtggaagacc
attactgcagaggagaagaagccttatgaggagaagtatcaggctgaaaaggaagcctat
ctgaaagtaatgacaaaggagaagcgcgagagtgaagcaatgaagcttttggaagaggaa
cagaagcagaagactgctatggaattgcttgagcaatacctccagttcaagcaggaagca
gatcaggaagagaacagcaagaagaccaagaaagaaaaggatccattgaaaccaaagcag
ccattgtctgcatttttcctgttctgtaatgagagaagagccgctctccttgcagagaac
aagagtgttctggaggtggccaagattgctggtgaagaatggaagaacatgacagaaaaa
cgaagggggccttatgaagaggttgcaaagaagaacagggaaaagtatatgcaagaaatg
gaggcttacaagcagacaaaggatgaagaagctatgaatctcaagaaagaagaggaagaa
ctggtgaaagtccagaaacaggaagcatggcagttgcttaagaagaaagagaaaactgaa
aacattatcaagaaaaccaaagagcaacgccagaagaagcagcagcagaatgttgaccct
aacaagcctaagaagcctgcatcttcattccttcttttcagcaaagaaaccaggaaaagt
ttaatggacgagcgccctggaatcaataattccaccctgactgcaatgatttctgtgaag
tggaaggaacttaatgaagaagagaggcaaatctggaactccaaagcagctgaagccatg
gaagcatataagaaggaactggaggagtacagcaaatctttagcagctgcaacttcaaat
gacaaacaacagcagtag

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