Entry |
|
Name |
(RefSeq) high mobility group B protein 13
|
KO |
K09273 | upstream-binding transcription factor |
|
Organism |
pop Populus trichocarpa (black cottonwood)
|
Brite |
KEGG Orthology (KO) [BR:pop00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:pop03000]
7497834
03021 Transcription machinery [BR:pop03021]
7497834
Transcription factors [BR:pop03000]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
7497834
Transcription machinery [BR:pop03021]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
7497834
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3:15499275..15501984
|
AA seq |
505 aa
MADTAVASTVPKKSRNNRKALKQKNPSTNESNIMAQKLSETSTATVLSPSDADPSKENHA
SHSQPRSSPKKGKSKAAKAKQNKEASASLFEKDFQEMQEMLQQLKLEKEKTEVLLKEKDD
MLKAKDEEIEMKGKEQQKMKMELKKLQKLKEFKPTMTLSFVQAMNDKQQDKKKKKGGNEI
KRPCPPYSLWCKAQWNEVKKENPDAEFKDISNILGAKWKTITAEEKKPYEEKYQAEKEAY
LKVMTKEKRESEAMKLLEEEQKQKTAMELLEQYLQFKQEADQEENSKKTKKEKDPLKPKQ
PLSAFFLFCNERRAALLAENKSVLEVAKIAGEEWKNMTEKRRGPYEEVAKKNREKYMQEM
EAYKQTKDEEAMNLKKEEEELVKVQKQEAWQLLKKKEKTENIIKKTKEQRQKKQQQNVDP
NKPKKPASSFLLFSKETRKSLMDERPGINNSTLTAMISVKWKELNEEERQIWNSKAAEAM
EAYKKELEEYSKSLAAATSNDKQQQ |
NT seq |
1518 nt +upstreamnt +downstreamnt
atggcagataccgctgtagcctcgacagttccaaaaaaatcaagaaacaacaggaaagct
ttgaaacagaagaacccatcaacaaatgaatccaatataatggctcaaaagctctctgag
acatctactgccaccgttttatctccatcggatgctgatccttcaaaagaaaaccatgcg
agtcattctcaacctcggtcttcacccaagaaagggaaatccaaggccgcgaaagcgaag
cagaataaagaggcttcggcttctttgtttgagaaagattttcaagaaatgcaagaaatg
ttgcagcagttaaagcttgagaaagaaaagaccgaggttttgttgaaggagaaagatgac
atgttgaaggctaaagatgaggagattgaaatgaaaggtaaagaacagcagaagatgaag
atggagttgaagaagttgcagaagttgaaggaattcaagcccaccatgactctctcattt
gttcaagcaatgaatgacaagcagcaagacaagaagaaaaagaagggtggcaatgaaatc
aaaaggccatgcccaccttactcactttggtgcaaagctcaatggaatgaggtaaaaaaa
gaaaacccagatgcagagtttaaggatatctctaacattttgggggcaaagtggaagacc
attactgcagaggagaagaagccttatgaggagaagtatcaggctgaaaaggaagcctat
ctgaaagtaatgacaaaggagaagcgcgagagtgaagcaatgaagcttttggaagaggaa
cagaagcagaagactgctatggaattgcttgagcaatacctccagttcaagcaggaagca
gatcaggaagagaacagcaagaagaccaagaaagaaaaggatccattgaaaccaaagcag
ccattgtctgcatttttcctgttctgtaatgagagaagagccgctctccttgcagagaac
aagagtgttctggaggtggccaagattgctggtgaagaatggaagaacatgacagaaaaa
cgaagggggccttatgaagaggttgcaaagaagaacagggaaaagtatatgcaagaaatg
gaggcttacaagcagacaaaggatgaagaagctatgaatctcaagaaagaagaggaagaa
ctggtgaaagtccagaaacaggaagcatggcagttgcttaagaagaaagagaaaactgaa
aacattatcaagaaaaccaaagagcaacgccagaagaagcagcagcagaatgttgaccct
aacaagcctaagaagcctgcatcttcattccttcttttcagcaaagaaaccaggaaaagt
ttaatggacgagcgccctggaatcaataattccaccctgactgcaatgatttctgtgaag
tggaaggaacttaatgaagaagagaggcaaatctggaactccaaagcagctgaagccatg
gaagcatataagaaggaactggaggagtacagcaaatctttagcagctgcaacttcaaat
gacaaacaacagcagtag |