Populus trichocarpa (black cottonwood): 7498112
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Entry
7498112 CDS
T01077
Name
(RefSeq) ABC transporter B family member 25, mitochondrial isoform X1
KO
K05662
ATP-binding cassette, subfamily B (MDR/TAP), member 7
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7498112
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7498112
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
7498112
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_29
AAA_18
AAA_16
AAA_15
DUF87
MMR_HSR1
Zeta_toxin
RsgA_GTPase
FtsK_SpoIIIE
AAA_23
AAA_28
Motif
Other DBs
NCBI-GeneID:
7498112
NCBI-ProteinID:
XP_024447653
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All DBs
Position
19:complement(15471514..15483987)
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AA seq
773 aa
AA seq
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MLVTATAATVASASNKCFRAHNNLHLLRHHHSNYYKYKNNNKNPLLFLCCFNHSLPNHHH
TRRCRLLLGPSSTDSSTALHASFPFLSNTSYSTPPSWNPNAFLSSSSSSSTPFRPPNSML
NGHAFFSTSAPKDKDDDDAANKASSSPSITTPAIADKSDQQLADMKILRTLASYLWMKDN
PEFRLRVLLALGFLLVAKVLNVQVPFLFKLAVDWLTVATGNATALASFTAANSTFLALFA
TPASVLIGYGIARCGSSAFNELRTAVFSKVALRTIRTVSGKVFSHLHELDLRFHLSRETG
GLSRIIDRGSRAINFILSSMVFNVVPTILEISMVSSILAYKFGAPFALITSLSVAAYVTF
TLSVTQWRTNFRKAMNKADNDASTKAIDSLINYETVKYFNNEAYEAEQYDEYLKRYEDAA
LKTSQSLAFLNFGQNVIFSTALSTAMVLCSHGIMNGQMTVGDLVMVNGLLFQLSLPLNFL
GSVYRETIQSLVDMKSMFHLLEEKPDIRDKDDAKPLMLKGGGIQFDNVHFSYLEERKILD
GVTFSVPAGKSVAIVGTSGSGKSTILRLLFRLFDTISGSIQIDGQDTRDVTLDSLRRSIG
VVPQDTVLFNDTIFHNIHYGRLSATREEVYDAARHAAIHDTVMNFPEKYSTIVGERGLKL
SGGEKQRVALARAFLKAAPIMLCDEATSALDSTTEAEILNALKSLSSNRTSVFIAHRLTT
AMQCDEIIVLENGKVVEQGPHEVLLTKAGRYAQLWAQQNSTVDALDSAIKLEA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgttagtgacggcgacggcggcaacagtggcttcggcatctaataagtgctttagggct
cataacaacctccacctccttcgccatcaccactctaattattacaaatacaagaataat
aataaaaatcctctcttatttctatgctgcttcaaccattccctccccaatcatcatcac
acccgaagatgccgccttcttcttgggccgagcagcaccgacagcagcactgctcttcac
gccagtttccccttcctatccaacacatcatactccactcctccctcatggaatcccaat
gctttcctttccagttcctcctcctcctcgactcctttccggccaccgaactcaatgctc
aatggccacgctttcttctcaacctcagctccaaaggataaagacgatgatgatgctgcc
aataaagcttcatcatcaccatcgattacgactcctgctattgctgataaatcagaccag
caacttgctgacatgaaaatcttacggactctggccagttatttatggatgaaagataac
cctgaatttcgcttaagggtgcttctggcccttggtttccttttggttgctaaggttttg
aatgttcaagtcccttttctttttaagctggctgtcgattggttgactgttgctacaggc
aatgctactgctcttgcttctttcaccgctgctaattccactttccttgctctctttgct
acccctgcttctgttctcattggttatggcattgcgcgctgtggatcctctgctttcaat
gaattgaggactgctgtgttctctaaagtagctctgaggacaatccgaactgtgtctggg
aaggttttttcacatttgcatgagcttgacctccgttttcatcttagtcgagaaactggc
gggttaagtagaataattgatcgtggtagccgagcaataaacttcatcctctcatctatg
gtattcaatgttgtaccaaccattctagagatatctatggtttcaagtatactggcatac
aaatttggagccccttttgcattgatcacttcactctcagtcgctgcatatgttactttc
acattgtctgtgacacagtggagaaccaatttcaggaaggccatgaataaagctgataat
gatgctagtacaaaggcaattgattcccttatcaattatgagactgtcaaatatttcaac
aatgaagcttatgaagctgagcaatatgatgagtacttaaagaggtatgaagatgctgcc
ttaaaaacatcgcaaagtcttgcttttttgaattttggccaaaatgtgatttttagcaca
gctctgtcaacagctatggttttatgttcacatggaattatgaatggccagatgactgtt
ggtgatttggttatggtaaatggactactcttccagctctcccttccacttaatttcctt
ggcagtgtttaccgtgagacaatacagagtcttgttgacatgaagtcaatgtttcactta
ctcgaggagaaacctgatattagagataaagatgatgccaaacctctaatgttaaaggga
ggtggcattcaatttgacaatgtacacttcagctacttggaagaaagaaaaattcttgat
ggtgtaactttttctgtaccagctggaaaaagtgtggctattgttggaacaagtggtagt
ggcaagtcaaccattcttagattactcttcaggcttttcgacactatttctggaagtata
caaattgatggtcaagatacaagggatgtaacactggatagtttgcggaggtctattggt
gttgtcccacaagacacagtacttttcaatgacacaatatttcacaacattcattatggt
cgtctttcagcaacgagagaggaagtctatgatgctgcccgacatgctgcaatccatgac
actgtcatgaacttccctgaaaaatattctacaatagtaggagaacgagggctcaagtta
agtggtggtgagaagcagcgtgtggctttggcccgtgcatttttgaaagccgctcctatc
atgctatgtgatgaagctacaagtgctcttgacagcaccactgaagcagagattctaaat
gcattgaaatcattatccagcaatcgaacttcagttttcattgcccataggcttacaact
gccatgcagtgtgatgagataatagttctggagaatggtaaagtggttgaacagggaccc
catgaagttctattgaccaaggcaggtagatacgcgcagctctgggcacagcaaaatagc
acagtggatgcccttgattcagccattaaattggaggcatag
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