Populus trichocarpa (black cottonwood): 7498135
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Entry
7498135 CDS
T01077
Name
(RefSeq) RNA-directed DNA methylation 4 isoform X1
KO
K28237
RNA polymerase II nuclear localization protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7498135
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
7498135
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GFIT
Motif
Pfam:
Iwr1
DUF4881
Motif
Other DBs
NCBI-GeneID:
7498135
NCBI-ProteinID:
XP_002325660
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Position
19:complement(14979077..14984147)
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AA seq
352 aa
AA seq
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MATIGETSMNSPQSKPVVVRVKRKAHQSRLDAFWLEINEKPTKKAMLDLEKLSISNNTVD
VQVEELKAKKVLVKHVETVTSMDATMEIVQSFASNSAHVVEEQKRTIKKYSKQEQILSRS
RRNQEVLASDARFEQIWRSRRGDKGASEDKALHDMCSFYDVVRVEESFNEVQELEVASLE
DQKILSSYLPLLREFLPSAVAEVESDIHAYLSNQGSAFDAIPLDVDDYVYDYYTVKDDMD
IDDIETASPFPLVKVEEEDFYDGPDDESEYDTDDSNAEDHPRNDYPDEASLDDHESESEA
SLDESEREEEEEEEESDAPSIKHSESDDADNFDDHGSYFDYPECEYGSDDED
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaatcggcgaaacctctatgaattctcctcagtcgaagcccgtcgttgttagg
gttaaacgcaaggctcaccagtctcgcctcgacgccttctggcttgaaatcaatgagaaa
ccaacgaagaaggcgatgttggacttggagaagttgtcaattagtaataacactgttgat
gttcaagtggaggaattgaaggctaagaaggttttggtgaagcatgttgagacagttact
agcatggacgctacaatggagatagtacaatcatttgcgtctaattctgctcatgtagtt
gaagaacaaaaacgaaccattaaaaagtacagtaaacaagagcagattttgtcaagatcc
agacgaaatcaagaggtattggcgtcggatgctcgttttgagcaaatttggagaagccga
aggggagacaaaggggcatcagaagataaagcactgcatgatatgtgtagtttttatgat
gttgttcgtgttgaggaaagtttcaatgaggtgcaagagcttgaagttgcatctttggag
gatcagaagattctatccagctatcttcctctactaagagagtttcttccaagtgctgtt
gcagaagtcgaatctgatatccatgcttacttgtccaatcaaggttctgctttcgatgca
atcccattagatgtagatgattatgtgtatgactattacactgtgaaggacgacatggac
atagatgatatagagactgctagcccgtttcctctggtaaaagttgaggaagaggatttc
tatgatggcccagatgacgagtcagaatatgacactgatgattcaaatgctgaagatcat
ccacgaaatgattatcctgatgaagcatctttagatgaccatgaatcagaaagtgaagca
tctcttgatgaatctgaaagagaggaggaagaggaagaggaggaaagtgatgctcccagc
attaagcattcagaatctgatgatgctgacaattttgatgatcacggaagttactttgat
tatcctgaatgtgaatatggcagtgatgatgaagattga
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