Populus trichocarpa (black cottonwood): 7498149
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Entry
7498149 CDS
T01077
Name
(RefSeq) F-box/LRR-repeat protein 3
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7498149
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
7498149
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_At5g56370
LRR_4
LRR_8
DH_Alsin
F-box_5
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
7498149
NCBI-ProteinID:
XP_002326094
UniProt:
B9INS4
LinkDB
All DBs
Position
19:14786073..14790812
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AA seq
667 aa
AA seq
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MRTNKKTTCNCNPFDFLTEEIIFTILDYLNDDPFAKKSFSLTCKAFYSIESHHRKTLKPL
RAELLLRTLHRYPHIEHLDLTVCPRIEDRMLNVVSLACKDALCSINLSRSRFFTNIGLSS
LVSSCFNLVEIDLSNGVELNDLAAAAIAEAKNLEKLWLARCKLITDLGIGCVAVGCRKLR
LICLKWCLKISDLGVQLLALKCKEIRSLDLSYLQITEKCLPSILQLQHLEDLVLEGCLGI
NDDGLSTLQQSCKSLKTFNMSNCHNHSHVGLLSLINGAENLRELTLAYGPSVTADLAKCL
HNFSGLHSVKFDGCLVKCSGIRAIGNWPNSLKELSFSKCSGVADDSLSFLVQGHKELRKL
DITCCRMIMYDSVDSITSSCCSLTSLRMESCSLVPKEAFVLFGQRCQLMEELDVTDTKID
DEGLKSISRCSKLSSLKLGICMNITDNGLKHIGSRCSKLKELDLYRSLGITDEGIAAVTF
GCPDLEVINIAYNDKVTDASLISLSRCSRLRVLEIRGCPHVSSKGLSAIAVGCRQLMVLD
IKKCFNINDTAMLSLAQFSQNLKQINLSYCSVTDVGLLALASVNRLQNITVLHLGGLTPN
GLAAALLACRGITKVKLHASFKPLIPKSLLGYIEAHGCVFHWRDKAFQVEMDTKGWKLHF
GKSAEAP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaagaaaaccacttgcaattgcaacccttttgattttctcactgaagag
atcatttttacaatccttgactatcttaacgatgacccttttgctaaaaagtcgttttct
ttaacctgcaaagccttttactccattgaatctcaccatagaaagacccttaagccactt
agagctgagcttttattaagaacccttcataggtaccctcatattgaacatcttgatcta
actgtttgccctcgcattgaagacaggatgttgaatgttgtttcattggcatgtaaggat
gctttgtgttccataaacctgtcaagatcaaggttttttactaatattgggttgtcaagt
ttggtttcaagttgtttcaatttggttgagattgatttgtcaaatggggtagagttgaat
gacttggctgctgctgcaattgctgaggctaagaatttggagaagttgtggctggccagg
tgtaagttgattactgatctggggattgggtgtgttgctgttggctgtagaaagttgagg
ttgatttgcttgaaatggtgtttgaagattagtgatcttggtgtgcagttgcttgctttg
aaatgtaaggagattaggagtttggatctctcttacctacagattacagagaaatgtctt
ccatctatcttgcagttgcagcatcttgaagatctagttcttgagggatgccttggtatt
aatgatgatggcctctctactctccaacagagttgcaagtcactcaagacatttaatatg
tccaactgtcataatcacagtcatgtgggtttgttgtctctgataaatggtgctgaaaat
ctacgagaacttactttagcttatggcccttctgtaactgcagatctggcaaaatgtttg
cataacttttcagggttgcattcggttaagtttgatggctgtttggttaaatgttccggt
attagagccattggaaattggcctaactcactcaaggaattgagcttcagtaagtgctca
ggggtcgcagacgacagtctatccttcttagtgcaaggacacaaagaattgaggaagtta
gatatcacatgctgtcgcatgataatgtacgactctgtagacagcataacaagctcatgc
tgttctctcacttccctcagaatggagtcctgtagcctggttcccaaagaagcatttgtc
ttgtttggacagcgttgtcaacttatggaggaattagatgtcacagataccaaaatcgat
gacgaaggtttgaagtccatctcaagatgttccaaactttcaagtttaaagttaggcatt
tgcatgaacataaccgacaatggactaaaacatattggaagcagatgttcaaagctcaaa
gagcttgatttgtataggtcattgggaataactgatgagggcattgcagcagttactttt
ggatgtcctgatctggaggtcattaacatagcttacaatgataaagttacagatgcttca
ttaatatcattatcaagatgttcaaggttaagagtgcttgagatcagaggatgtcctcat
gtctcatcaaaaggtctatcagctattgctgtcggatgtaggcaacttatggtgctggac
attaagaagtgcttcaatatcaatgatactgcaatgctctcacttgctcagttttcccaa
aacctcaaacagataaacttgtcgtattgttcggtaacagatgttggccttttggcacta
gccagcgtgaatcgccttcagaacataactgtgttacacttgggaggattaactccaaat
ggcttggcagctgctctattagcttgtagaggaataactaaagtgaagctacatgcttcc
ttcaaaccattaattcctaaatcccttctcggttacatcgaagcccatggctgtgtattt
cattggagagataaagcattccaggtggagatggatacaaagggatggaagttacatttt
gggaaaagtgctgaagctccatag
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