Populus trichocarpa (black cottonwood): 7498181
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Entry
7498181 CDS
T01077
Name
(RefSeq) KH domain-containing protein At4g18375 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7498181
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
7498181
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
7498181
NCBI-ProteinID:
XP_024463040
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Position
8:5540884..5546143
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AA seq
545 aa
AA seq
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MDGQRNDHGKRSQHSQSDYGGGKRRNPGDDPSDQHTVTNEDTVYRYLCPLRKIGSIIGKG
GEIAKQLRADSKSNIRISEAMPGYDERVVTIFSSSEETNLFEDTGEYVCPAQDALFMVHD
RVIAEDLNNAAAAEEEEEDRFGEVQQVTVRMLVPTDQIGCVIGKGGQVIQNIRSETRAQI
RITKDEHLPPLALSTDELLLIHGEPSVVRKALYQVATRLHENPSRSQHLLLSSSANTYQS
GGMFVTANAGAPLLGLYGNYKGSWSSSFYPDQRDEASAKDFSLRLVCPIANIGGVIGKGG
GIIKQIRQESRASIKVDSSGAEGNDCIIFISAKEFFEDQSPTMNAALRMQPRCSEKTEKE
SGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNLTRANIRIISEDNLPKVAGEDDEMVQI
TGSLEVASNALLQVILRLKANIFGRDGALTTFPPALPYIPVSLDTSDGPKYGSRDRQSRG
RGYSSSSSGYGSHDVNPSDNYGSNGGPLIGGEGSYGAYGGFSSGRSSGAGLSGQNPVSQR
KKHGY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggatggtcaaaggaatgaccatggcaaaagatcacagcattcacaatctgattatggt
ggaggtaaaagaagaaaccctggagacgacccttctgaccagcatactgttaccaatgaa
gatacggtctatcgttatttatgtcctttaagaaagattggtagtattattggtaaaggt
ggagagattgctaagcaattaagggcggatagtaagtcaaatattaggatcagtgaggca
atgccgggttatgatgagcgagttgttactatttttagttccagtgaagaaactaatctt
tttgaagatactggtgagtatgtttgtcctgcccaagatgcgctttttatggttcacgat
agggttattgccgaggacttgaataatgctgctgctgctgaggaggaggaggaggatagg
tttggggaggtgcagcaagttactgtgagaatgcttgtgcccacggatcaaattggttgt
gttattgggaagggtggacaagttattcagaatataaggagtgagactcgtgcgcagatt
cggattaccaaggatgagcatttacctcctttggctctgagtactgatgagcttctcctg
atacatggagaaccttctgttgtgagaaaggcactttaccaagtggcaacacggcttcat
gagaatccatctcggtcacagcacttgctattgtcttcttcagccaacacatatcaatct
ggtggcatgtttgtcactgcaaatgctggagcccctcttttgggtctatatggcaattat
aaaggtagttggtcatcatccttttacccggaccagagagatgaagcttctgcaaaagat
ttttctcttcgtttagtttgtcccattgcaaacatcggaggtgtgattgggaaaggtggc
ggaatcatcaaacaaattcgacaggaatccagggcttctattaaagttgatagctcaggg
gctgaaggaaatgattgcataatatttatatcagcaaaggagttctttgaagatcaatct
ccaaccatgaatgcagcactgcgcatgcaaccacgatgcagtgaaaaaactgaaaaggaa
tcaggtgattctgtaatcaccacccgtctgcttgtgggaagatcacaaattggatgtctt
atggggaaaggtggggcaattatttcagaaatgaggaatctaacaagggcaaacatccgg
attatttccgaagacaatcttcccaaggttgctggtgaagatgatgagatggtgcagatc
accggaagccttgaagttgctagtaatgctcttttacaagtgattttaaggttgaaagcc
aatatatttggaagagacggagcactaactacatttccaccggctcttccgtacattcct
gtgtcactagatacatcagatggtccaaaatatgggagccgagacagacaatcacgtggg
cgcggatactcttcttcatctagtggatatggttctcatgatgtgaacccaagtgataat
tatggaagtaatggaggtccactgattggtggtgaaggcagttatggagcatatggtggc
ttctcatctggtcgttctagtggtgctgggttatctggtcagaaccctgtttcccaaaga
aaaaaacatgggtattag
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