Populus trichocarpa (black cottonwood): 7498219
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Entry
7498219 CDS
T01077
Name
(RefSeq) protein CRABS CLAW
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7498219
Transcription factors [BR:
pop03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
7498219
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GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
HMG_box
Ccdc124
Zn_ribbon_Elf1
Zn_ribbon_Com
Motif
Other DBs
NCBI-GeneID:
7498219
NCBI-ProteinID:
XP_002311351
UniProt:
B9HIG4
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Position
8:6096168..6098524
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AA seq
180 aa
AA seq
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MNLEEKASTEVPSSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCNNLSFLSTRPP
NQGQCLDQYHRLSLQGVSSNEKFLFNEKQGFCTDIRKGESSSSSTSSEQPVPTVPFVVKP
PEKKHRLPSAYNRFMKEEIKRIKAADPEIPHREAFSTAAKNWARARYLPKSGAGSGSPNI
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagaagagaaagcaagcacagaggttccatcatctgagcatctctgctatgtc
cgttgcaacttctgcaacactgttcttgcggtcgggattccatgcaagaggctgctggac
actgtgactgtcaaatgtggtcattgcaataatctctcctttctcagcaccagacctccc
aaccaagggcaatgtcttgatcagtaccaccgactgagtctacagggagtttctagtaat
gaaaagttcttattcaatgagaagcaagggttttgcactgatatcagaaagggcgaatcc
tcatcctcctcgacctctagcgaacaaccggtgcccacagtacccttcgtagtaaagccg
cctgagaagaaacaccgacttccatctgcttacaataggtttatgaaggaggagataaag
cgcatcaaagcagccgatcctgagataccacacagagaagcttttagcacagcagctaaa
aattgggctagggctaggtaccttccaaagtcgggtgctggttctgggagccctaatatt
taa
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integrated database retrieval system
