Populus trichocarpa (black cottonwood): 7498237
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Entry
7498237 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
7498237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7498237
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
7498237
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
HECT type E3
7498237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
7498237
NCBI-ProteinID:
XP_002312309
UniProt:
B9HIK0
LinkDB
All DBs
Position
8:complement(6358729..6373554)
Genome browser
AA seq
1033 aa
AA seq
DB search
MFFNGDSSTRKRVDLGGRSSKERDRKKLLEQTRLERNSRLWVKQQNAAAVKIQKWFRGRK
AVEAEHSRVRGKFHGTYGKCCQNVDRHCFGPDSEFFRQLLFFFNAKDSDDFTILVETCRL
LLQNVQDSGDIVSLFAGGDYSTKHALVEYRVKKLSFACIWAIYQNRKQLKDQLVMMPRDS
SITATLLLEAVALLIDPKLPWACKVVGYLLQRNVFALFREIVLTGKENMRSDSSIRNASP
LERILALVISHVGQKPCICPTIDLQWSFSSQMLTIPLLWRLFPNLKEVFATQGLSRHYIN
QMARCMRNNTYVLPNDLSVEYPGHACLLGNMLETAGAALSHADCSFEMAIDIAAVTTFLL
EALPPIKSSSPEIRPSSTLDEDDMALPDEMEIVLNKDLEHKIVHAMHSRFLLQLTSVLFG
EITMVSGSNHGLDDKEVAAIGAACAFLHVAFNTLPVERMMTVLAFRTELVQVLWNFMKQC
HENKKWPSLPDQLSYLPGNAPGWLLPLAVFCPVYKYMLMLVDNEEFYEQEKPLSLKDVRC
LIVILRQALWQLLWVNPKVNSNSVKLIKNTSVYSGNPIESIKQRVSLVASELLSQLQDWN
NRRQFAPPNDFHADGVDDSFISQAVIDGTKANDIMKQAPFLVPFTSRVKIFNSQLLAVRQ
RQGSHGVFTRNRYRIRRDHILEDAYNQMSALSEEDLRGLIRVSFINEFGVEEAGIDGGGI
FKDFMENITRAAFDVQYGLFKETSDHLLYPNPGSGMLHEQHLQFFHFLGTLLAKAMFEGI
LVDIPFATFFLSKLKKKYNYLNDLPSLDSELYRHLIFLKRYQGDISDLELYFVIVNNEYG
ELTEEELLPGGRNQRVTNDNVIPFTHLVSNYRLNYQIRLQSSHFMRGFQQLIKKEWIDMF
DEHELQLLISGSLDGLDIDDLRIHSNYGGGYHSEHYVIEMFWEVLKGFSMENQKKILKFV
TGCSRGPLLGFKYLEPLFCIQRAGGTASEEALDRLPTSATCMNLLKLPPYRSKEQLATKL
LYAINADAGFDLS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcaacggcgattcatccacgaggaagcgagtcgatttaggaggccggagttcg
aaggagagagataggaagaagcttcttgaacaaactagattggaacgtaatagtcggttg
tgggtgaagcaacagaatgccgctgctgtcaaaattcaaaaatggttcagagggagaaag
gcagtggaggctgaacattctagggtgcgagggaagttccatggaacctatggcaagtgt
tgccaaaatgtagacaggcattgttttggtccggattcagagttcttccggcagctatta
tttttcttcaatgcaaaagatagtgatgatttcacaatcctcgtggagacttgccgattg
cttctgcaaaatgttcaagatagcggggatatcgtgagcctatttgctggtggggattat
tcaaccaagcatgctttggtggagtatagggtcaaaaaactatcatttgcctgtatttgg
gctatctatcaaaatagaaaacaattgaaggatcaattagtgatgatgcccagggattca
agcataacagcaactctcttgctggaagctgtagctttgctgatcgatcccaaacttcca
tgggcttgtaaggtcgttggttatctcttgcaaaggaatgtgtttgctctatttcgagag
attgttctaacaggaaaggagaatatgaggagtgacagttccatcagaaatgcatctcca
ttggagcgtattcttgcccttgtgatatctcatgttggtcagaagccatgtatttgcccc
accattgatctgcaatggagtttctcatctcagatgctgacaattcctttactatggcga
ctttttcctaatttaaaagaggtttttgcaactcaggggctgagccgacattacattaat
cagatggcacgttgcatgcggaataatacttatgtactgcccaatgatctttctgtggaa
tatcctggccacgcttgtcttctaggaaatatgttagaaaccgcaggagctgctttgtct
catgctgactgttcatttgagatggctatagatattgctgccgtgacaacattcttgttg
gaggcacttcctcctataaaatcatcaagtccagaaattagaccaagctccactctggat
gaggatgatatggctttgcctgatgaaatggaaattgtcttaaacaaggatttggaacac
aagatagtccatgctatgcattcacgctttctcttgcaattgacgagtgttttatttggg
gagattacaatggtcagtggttcaaaccatggactggacgataaagaggttgcagctatt
ggtgctgcttgtgcttttttgcatgttgctttcaacactttgccagttgagcgaatgatg
actgtactagcttttagaactgaacttgttcaagtgctttggaattttatgaagcagtgt
catgagaataaaaagtggccatccttgcctgatcagttatcatatctaccaggaaatgca
cctggctggctattacctctggctgttttttgtcctgtatataagtacatgcttatgtta
gttgacaatgaggagttctatgaacaggagaagcctttatcattgaaggatgtccggtgc
ctaattgttattttgagacaggccctatggcagctcctatgggtgaatcctaaagtgaac
agtaattcagttaaactcatcaagaacacctctgtttatagtgggaaccctattgaatct
attaaacagagagttagtcttgtagcctctgagctcctctctcagttgcaagattggaac
aatagacgacaatttgcaccacccaatgatttccatgctgatggtgttgatgactcattt
atttctcaggctgtaatagatggaaccaaagcaaatgacattatgaaacaggctcctttc
ttggtaccttttacaagcagagttaaaatattcaattcacaattattggcagttaggcaa
agacaagggtcccatggtgtttttacaagaaacagatacagaatacggagagatcatatt
ttggaagatgcttataatcagatgagtgcattgtccgaggaggatcttcgaggattgatt
cgtgtatcatttatcaatgagtttggagttgaggaagctggcattgatggtggtggcatt
tttaaagatttcatggaaaacattactcgagctgccttcgatgtgcagtatgggttgttt
aaggaaacatctgatcacctactctaccccaatcctggatcaggaatgctacacgaacaa
catcttcaattttttcattttcttggaactcttcttgcaaaggctatgtttgaaggtatt
cttgttgatataccttttgcaacattcttcctaagcaaattaaagaagaagtacaactat
ttgaatgacttgccttcattggattcagaattatatcgccaccttattttcctaaagcgt
tatcaaggtgatatttctgacttggagctctactttgtcatcgtaaataatgaatatggc
gagctaacagaagaggagctgcttcctggaggaagaaaccagcgtgtcactaatgacaat
gtcattccttttacccatcttgtatccaattatcgtctaaattatcagatacgtctacaa
agttctcatttcatgaggggctttcagcagcttataaagaaagaatggattgatatgttt
gacgagcatgaacttcagcttctgatatcaggttcgcttgatggcttggatattgatgac
ttgcgcattcatagcaattatggtggtggttatcatagtgagcattatgttattgagatg
ttctgggaagttctgaaaggtttttccatggaaaatcaaaagaaaattttgaagtttgtg
actggttgttcacggggacctttgcttggatttaaatatcttgagcccttattttgtata
caaagggctgggggcactgcctctgaggaagctcttgatcggctgccgacatcagctact
tgcatgaatcttctaaagcttccaccttatagaagcaaagagcagctagcaacgaaattg
ctatatgctataaatgctgatgcgggttttgatttgagctga
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integrated database retrieval system
