Polymorphobacter sp. PAMC 29334: KZX46_04630
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Entry
KZX46_04630 CDS
T07387
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
poq
Polymorphobacter sp. PAMC 29334
Pathway
poq00300
Lysine biosynthesis
poq01100
Metabolic pathways
poq01120
Microbial metabolism in diverse environments
poq01230
Biosynthesis of amino acids
Module
poq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
poq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KZX46_04630 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
poq01002
]
KZX46_04630 (dapE)
Enzymes [BR:
poq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
KZX46_04630 (dapE)
Peptidases and inhibitors [BR:
poq01002
]
Metallo peptidases
Family M20
KZX46_04630 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
QYE35285
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All DBs
Position
complement(179399..180523)
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AA seq
374 aa
AA seq
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MIDALDLARRLIACPSVTPADAGAQDVLAAALEAIGFTVHRLTFGEAPDGPIANLFATIG
SGAPHFAFAGHTDVVPPGNGWTGDPFASTVENGWLVGRGAADMKGGIAAFVAAAATTVAR
GFDGKLSLIITGDEEGPATFGTAPLLDWMEANGHVPDFCLVGEPTSAAVLGDMVKIGRRG
SLNAWITVKGAQGHVAYPAKADNPVTRLVRILTRAKERVLDTGSDWFDASNLEVTDLTVG
NPAGNVIPAQASARLNIRFNDLHRGADLEAWLRAIVAEEAPSANVVVRISGEAFLTEPGA
LSTLVAGAIESVTGTTPALSTSGGTSDARFIRRLCPVVEFGLVGASMHKIDEAVPVADIA
ALTAIYTEVLTRVF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgccctcgacctcgcccgccgcctgatcgcctgcccgagcgtcactcccgcc
gatgcgggcgcacaggatgtcctcgccgccgcgctcgaagcgatcggcttcaccgtccac
cggctgaccttcggcgaagcgcccgacgggccgattgccaatttgttcgcaacgatcggc
agcggcgcgccgcatttcgcctttgccggacataccgacgtcgttccccccggcaacggg
tggacaggcgacccgttcgcctcaacagtcgagaatggctggctcgtcgggcggggcgca
gccgacatgaagggcgggatcgccgcgttcgtcgctgccgccgcgaccacggtcgcgcgc
ggcttcgatggcaagctgagcctgatcattaccggcgacgaggaaggccccgcgaccttc
ggcaccgcgccgctgctcgactggatggaagcgaacggccatgtccccgatttttgcctc
gtcggcgagccgactagcgcggcggtgctcggcgacatggtgaagatcgggcggcgcggg
tcgctcaacgcgtggatcacggtcaagggcgcgcagggccacgtcgcctatccggccaag
gccgacaatccggtgacgcgacttgttcgcatcctgacgcgagccaaggagcgcgtgctc
gataccggcagcgactggttcgacgcgtcgaacctcgaggtcaccgacctcaccgtcggc
aacccggcggggaacgtcatcccggcgcaggccagcgcgcggctcaacatccgcttcaac
gacctccaccgcggggccgacctcgaggcatggctgcgcgcgatcgtcgccgaggaggcg
ccgtcggccaacgtcgtcgtccgcatttcgggtgaggcattcctgaccgagcccggcgcg
ctgtcgacgcttgtcgccggggcgatcgagtcggtgaccggcacaacgcccgcgctgtcg
acgagcggcgggacgtcggacgcacgcttcatccgccgtctgtgcccggtcgtcgagttc
gggctcgttggcgcgtcgatgcacaagattgacgaagcggtgccggtcgccgacatcgcc
gcgctgacggcgatctacaccgaagtgctgacgcgcgtcttttag
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