Polymorphobacter sp. PAMC 29334: KZX46_04985
Help
Entry
KZX46_04985 CDS
T07387
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
poq
Polymorphobacter sp. PAMC 29334
Pathway
poq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
poq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KZX46_04985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poq03400
]
KZX46_04985
Enzymes [BR:
poq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KZX46_04985
DNA repair and recombination proteins [BR:
poq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KZX46_04985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QYE36674
LinkDB
All DBs
Position
complement(241265..242701)
Genome browser
AA seq
478 aa
AA seq
DB search
MTAILARPDDFDGWRAAARRLAVAGVSPGEVVWQVGDTATDLLGGDDLPAVDAPMFNVPK
AFIEVTGRVICHRDQERFALLYTALTTLRTRPKLLDDAADPLVRRLYDLDKAVRRDVHKM
RAFVRFRDVPDPEGERFAAWFEPEHHIVRRNASFFARRFANMRWSILTPNECVHWDGELS
FTPGATRADAPDGDALEETWRTYFASIFNPARLKVKAMTAEMPKKYWRNLPEASLVPGLI
AGAEERTRMMIDAGDKAGMTNAAVQAGVGAWVRTGDGSPADALAALRDDAAQCKRCPLFG
PATQTVFGEGPSDARLVFVGEQPGDSEDLAGRPFIGPAGQVFDRALAAAGIDRARTYVTN
AVKHFKFEQRGKRRIHSKPDISEINACRWWVEHERAAIRPAVTVALGASAARSLTGKTVT
ISKERGRPLILADGTEAWITVHPSFLLRIEDKAAAALEFDRFVADLVAVRERLAVLSG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
ctgaccgcgatccttgcccggcccgacgatttcgacgggtggcgggccgcggcgcggcgg
ctcgcggtggcgggcgtttcgccgggcgaggtcgtctggcaggtcggggataccgcgacg
gatctgcttggcggcgacgatctgccggcggtcgatgcgccgatgttcaacgtccccaag
gcgttcatcgaggtcactggccgggtgatctgccaccgcgaccaggagcgctttgccctg
ctttatactgcgctgacgacgctgcggacccggccgaagttgctcgacgatgcggccgat
ccgctggtccggcggctatacgacctcgacaaggcggtccgccgcgacgtccacaagatg
cgcgccttcgtccgctttcgcgacgtccccgaccccgagggcgagcgcttcgcggcgtgg
ttcgaacccgagcatcacatcgtcaggcgcaatgccagcttctttgcccggcgcttcgcc
aacatgcgctggtcgatcctgacccccaacgagtgcgtccactgggacggcgagttgtcc
ttcacccccggggcgacccgagccgatgctcccgacggcgacgcgctcgaggagacgtgg
cggacctatttcgccagcatcttcaacccggcgcggctcaaggtgaaggcgatgaccgcc
gagatgccgaagaaatactggcgcaacctgcccgaggcgtcgctcgtcccggggctgatc
gccggggccgaggaaaggacacggatgatgattgatgcgggcgacaaggcgggaatgacc
aacgccgcggtgcaggcaggggtaggggcgtgggtacggaccggcgacggcagcccggcc
gatgcactcgccgcgctccgtgacgacgcggcgcagtgcaagcgctgcccgttgttcggc
ccggcgacgcagacggtgttcggcgaggggccgtccgacgcgcggctggtcttcgtcggc
gagcagcccggcgacagcgaggatctcgccggtcgcccgttcatcggcccggcggggcag
gtcttcgaccgcgcgctcgccgccgccgggatcgaccgcgcgcggacctatgtcaccaac
gcggtcaagcacttcaagttcgagcagcgcggcaagcggcgcatccattcgaagcccgac
atcagcgagatcaatgcctgccgctggtgggtcgagcacgagcgcgccgcgatccgtcca
gcggtgacggtcgcgctcggggcgagcgcggcgcggtcgctgaccggcaagacggtgacg
atctcgaaggaacgcgggcggccgctgatcctcgccgacggcaccgaggcgtggatcacc
gtccacccgagcttcctgctgcggatcgaggacaaggcggcggcagcgctcgagttcgac
cgcttcgtcgccgatctggtcgcggtgcgggagcggctggcggtgctgtcgggttaa
DBGET
integrated database retrieval system
