Polymorphobacter sp. PAMC 29334: KZX46_07570
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Entry
KZX46_07570 CDS
T07387
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
poq
Polymorphobacter sp. PAMC 29334
Brite
KEGG Orthology (KO) [BR:
poq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poq03032
]
KZX46_07570
03400 DNA repair and recombination proteins [BR:
poq03400
]
KZX46_07570
Enzymes [BR:
poq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KZX46_07570
DNA replication proteins [BR:
poq03032
]
Prokaryotic type
DNA Topoisomerases
KZX46_07570
DNA repair and recombination proteins [BR:
poq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KZX46_07570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QYE35804
LinkDB
All DBs
Position
788128..789096
Genome browser
AA seq
322 aa
AA seq
DB search
MLNYTDTSEPGITRRKRGKHWHYFAIDGVRITAADEIARLNKLGVPPAYARVWFSPDPSG
HLQAVGYDAKGRKQYRYHESFRQQREADKYDRCGGFGEALPHLRAIVERDIAERGLGRSK
VLAAIVRLLDSGHVRVGNDVYASENESYGATTLLNEHSAVRGNKVRLEYRGKSGKMQRVV
IADEALAKIVRRCHDLPGQALFQYVGDDNEPHRIGSSDVNAYIREGMGDGFSAKHFRTWG
ASVIAFTAIRDGVTTLKEMLEPVAAALGNTPAISRKSYVHPALIALVNDGQMDKVVEAKL
PRLTRYLSAAERGLIAFLATAS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaactataccgacaccagcgaacccggcatcacgaggcgcaagcgcggtaaacac
tggcattatttcgccatcgacggggtccgcatcactgcggcggacgagatcgcccgtctc
aacaagctcggcgtgccacctgcctatgcccgtgtgtggttcagcccggacccgtcggga
caccttcaggcagtcggctacgacgccaagggccgcaagcaataccgctatcacgagagc
ttccgtcagcagcgcgaggccgacaaatacgatcgttgcggcggtttcggcgaggcgctg
ccgcatctccgcgcgatcgtcgagcgcgacatcgccgagcgcggactcggccggtccaag
gtccttgctgcgatcgtccggttgctcgattcagggcacgtccgggtcggcaacgacgtc
tacgcgagcgagaacgagagctatggcgcgacgaccttgctcaacgaacatagcgcggtt
cgcggcaacaaggtccggctcgaatatcgcggcaagtcgggcaagatgcagcgcgtcgtc
attgccgacgaggcgctcgccaagatcgtccggcgctgccacgacctgccggggcaggcg
ctgttccagtatgtcggcgatgacaacgagccgcaccgcatcggctcgtccgacgtcaac
gcctatatccgcgaggggatgggcgacggcttctcggcgaagcacttccgcacatggggc
gcgagcgtcatcgccttcaccgcgatccgcgatggtgtcacgaccttgaaggagatgctc
gaacccgttgcggcggcgctcggcaacacgccggcgatcagccgcaagagctatgtccat
ccggcattgatcgccctcgtcaacgacggtcagatggataaggtcgtggaagcgaagctg
ccgcgtctgacgcgctatctcagcgcggccgaacgcgggttgattgcctttctcgctacc
gcatcgtga
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