Polymorphobacter sp. PAMC 29334: KZX46_10300
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Entry
KZX46_10300 CDS
T07387
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
poq
Polymorphobacter sp. PAMC 29334
Pathway
poq00300
Lysine biosynthesis
poq00470
D-Amino acid metabolism
poq01100
Metabolic pathways
poq01110
Biosynthesis of secondary metabolites
poq01120
Microbial metabolism in diverse environments
poq01230
Biosynthesis of amino acids
Module
poq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
poq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KZX46_10300 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KZX46_10300 (dapF)
Enzymes [BR:
poq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KZX46_10300 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
TAL_effector
CntK_N
Motif
Other DBs
NCBI-ProteinID:
QYE36283
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Position
complement(1349030..1349821)
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AA seq
263 aa
AA seq
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MLRPFIKMHGLGNDFVVFDARSQPLALTPAQVVAVADRHTGIGCDQLIVIEPSTVATALM
RIWNGDGGEVEACGNAARCVATLLGTSATIATAGGILDATSTAGSASVTYPPPQFDWDAI
PLAYAVDTRDVPVAWDSLEHGQAVNVGNPHIVFFVADANAVPLADLGPLIEHDALFPERV
NVGVAHVVDRGHIVLRVWERGAGLTLACGTGAVACAVAAMRRGLVDPRVMVTLPGGDLTV
EWHGAEVTLAGPAVTSFTGTIDL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgctccgccctttcatcaagatgcacggcctcggcaacgacttcgtcgtgttcgacgcg
cgcagccagccgctggcgctgaccccggcgcaggtcgtcgcggtcgccgaccggcacacc
gggatcggctgtgaccagctgattgtgatcgagccgagcaccgtcgcgaccgcactgatg
cggatctggaacggcgacggcggcgaggtcgaagcctgcggcaacgccgcgcgctgtgtc
gcgacgctcctcggaacgagcgcgacgattgcgaccgcaggcggcatcctcgatgcgact
tcgaccgcggggagtgcgagcgtgacttacccgccgccgcaattcgactgggacgcgatc
ccgctcgcctatgcggtcgacacgcgcgacgtgccggtggcgtgggacagcctcgaacac
gggcaggcggtcaacgtcggcaacccgcacatcgtcttcttcgtcgccgacgcgaacgcg
gtgccgctcgccgacctcggccctctgatcgagcatgacgcgctgttccccgagcgcgtc
aacgtcggcgtcgcgcatgtcgtcgaccggggccatatcgtgctcagggtgtgggagcgc
ggcgccggattgacgctggcgtgcggcactggtgcggtggcgtgcgcggtcgcggcgatg
cggcgcgggctggtcgatccgcgagtcatggtgacgctgccgggcggcgatctcacggtc
gagtggcacggcgcggaggtgacgctggccgggcctgccgtgacgagtttcaccgggacg
atcgacctgtga
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