KEGG   Polymorphobacter sp. PAMC 29334: KZX46_15705
Entry
KZX46_15705       CDS       T07387                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
poq  Polymorphobacter sp. PAMC 29334
Pathway
poq02024  Quorum sensing
poq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:poq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KZX46_15705 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KZX46_15705 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:poq03019]
    KZX46_15705 (hfq)
   03036 Chromosome and associated proteins [BR:poq03036]
    KZX46_15705 (hfq)
Messenger RNA biogenesis [BR:poq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     KZX46_15705 (hfq)
Chromosome and associated proteins [BR:poq03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    KZX46_15705 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1
Other DBs
NCBI-ProteinID: QYE36909
LinkDB
Position
complement(2534350..2534604)
AA seq 84 aa
MAEKPSSLQDVFLNTVRKTKTPVTMFLVNGVKLQGNITWFDNFSVLLRRDGSSQLVYKHA
ISTVMPAGPIQLFDAEKVDDDGLD
NT seq 255 nt   +upstreamnt  +downstreamnt
atggccgagaagccgagcagcctccaggacgtattcctcaacacggtccgcaagactaag
acgcccgtgacgatgttcctcgtcaacggcgtcaagctccagggcaacatcacgtggttc
gacaacttctcggtgctgctgcgccgcgatggcagttcgcaactcgtgtacaagcacgcg
atctcgaccgtgatgcccgccggcccgatccagttgttcgacgctgaaaaggtcgacgac
gacggccttgattga

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