Polymorphobacter sp. PAMC 29334: KZX46_17380
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Entry
KZX46_17380 CDS
T07387
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
poq
Polymorphobacter sp. PAMC 29334
Pathway
poq03420
Nucleotide excision repair
poq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
poq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KZX46_17380
03430 Mismatch repair
KZX46_17380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poq03400
]
KZX46_17380
Enzymes [BR:
poq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KZX46_17380
DNA repair and recombination proteins [BR:
poq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KZX46_17380
MMR (mismatch excision repair)
Other MMR factors
KZX46_17380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
DUF3553
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QYE34516
LinkDB
All DBs
Position
2877747..2880032
Genome browser
AA seq
761 aa
AA seq
DB search
MHASPASPAPAPEPPYMDGLNAAQREAVLTTEGPVLLLAGAGTGKTRALTSRLAHIIFTR
RAWPSEILAVTFTNKAAREMQHRMGLLLGGSAEGMQFLGTFHSVASRMLRRNAGLVGLES
NFSILDTDDQLRLLKQVLIEANVDDKRWPAKGLASLIDRWKNRGWTPAQVPATEEGGYDN
KSVALYTRYQERLVALNACDFGDLLLHMLTIFLGHPDVLAEYQRRFKYVLVDEYQDTNVS
QYLWLRLLAQDRRNICCVGDDDQSIYSWRGAEVANILRFEVDFPGATVIRLEQNYRSTPH
ILGAAGGLIAKNSGRLGKTLWTERNSGHKVKVVGVWDGPEEARLTGDAIERLQREGASLN
DMAILVRAQFQTREFEDRFITTGLPYKIVGGFRFYERAEVRDAIAYLRVVVQPSDGLAFE
RIVNTPKRGLGDKAMQSLHAHARATNKPLSSAANALIETDELTPAARRSLSNFMTDLKRW
RDQVDTLPHAELARIVLEESGYIAMYQNQRTSEADGRLENLQELTRAMDEFESMTAFLEH
VSLVMENDKADHEERVTIMTLHAAKGLEFDHVFLVGWEEGVFPSQRSLDEGGNASLEEER
RLAYVGITRAKRAATISHAANRRIYGQWTSSIPSRFVSDLPDDHIDVSSTMSGGPSLWRA
ALGGGDPFADVTRGAGRGPGWARATAMGGASVPGRGGLQIEARASAVSVGQPGRKDVAVG
ARVFHSKFGYGAVAAIEGNKLEIEFEKAGRKRVLDSFIELV
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctcgcccgcctcccccgctcctgcgcccgaaccgccgtacatggacggcctc
aacgcggcgcagcgcgaggcagtgctgaccaccgaaggcccggtgctcctcctcgccggc
gccgggaccggcaagacccgcgcgctgaccagccgccttgcgcacatcatcttcacccgc
cgggcgtggccgtcggaaatccttgcggtgaccttcaccaacaaggcggcgcgcgagatg
cagcatcgcatggggctgctgcttggggggagcgcggaaggcatgcagttcctcggcacc
ttccactcggttgcgtcgcgcatgctgcgacgcaacgctgggctcgtcgggctggagagc
aacttctcgatcctcgacaccgacgaccagttgcggctgctcaagcaggtcctgatcgag
gcgaacgtcgacgacaagcgctggccggcgaaggggctggcgtcgctgatcgaccgctgg
aagaaccgcggctggaccccggcgcaggtccccgccaccgaggaaggcggctacgacaac
aagtcggtcgcgctgtatacgcgctaccaggagcgtctcgtcgcgctcaacgcgtgcgac
ttcggcgacctgcttctccacatgctgacgatcttcctcggccaccccgatgtgctggcg
gaatatcagcgtcgcttcaaatatgtcctcgtcgacgaatatcaggacaccaacgtcagc
cagtatctgtggctgcggctgctcgcgcaggaccgccgcaacatctgctgcgtcggcgac
gacgaccagtcgatctattcgtggcgcggtgccgaggtcgccaacatcctccgcttcgag
gtcgactttcccggcgcgaccgtcatccgcctcgaacagaattaccgctcgaccccgcat
atcctcggcgccgccggcgggctgatcgccaagaactcgggacgcctcggcaagactctg
tggaccgagcgcaactcgggccacaaggtcaaggtcgtcggcgtctgggacggacccgag
gaagcgcggctgaccggcgacgcgatcgagcgcctccagcgcgagggcgcgtcgttgaac
gacatggcgatcctcgtccgcgcccagttccagacgcgcgagttcgaggaccgcttcatc
accaccggcctgccgtacaagatcgtcggcggcttccgcttctatgagcgcgccgaggtc
cgcgacgcgattgcctacctccgcgtcgtcgtccagccatcggacgggctggcgttcgaa
cggatcgtcaacacgcccaagcgcgggctcggcgacaaggcgatgcagtcgctccacgcc
cacgcccgcgcgacgaacaagccgctgtcgtcggcggcgaacgcgctgatcgagaccgat
gagctgacccccgcagcacgccggtcgctgagcaatttcatgaccgacctcaagcggtgg
cgcgaccaggtcgacaccctgccccacgccgaactcgcgcggatcgtcctcgaggaatcg
gggtatatcgcgatgtaccagaaccagcggacgtcggaggctgacgggcggctggagaac
ctccaggaacttacccgcgcgatggacgagttcgaatcgatgaccgcgttcctcgaacac
gtcagcctcgtcatggagaacgacaaggccgatcacgaggagcgcgtcacgatcatgacc
ctccacgccgcgaagggcctcgaattcgaccacgtcttcctcgtcggctgggaggaaggc
gtcttcccgtcgcagcgctcgctcgacgagggcggcaacgcgtcgttggaggaggaacgc
cgcctcgcctatgtcggcatcacccgggcgaaacgcgccgccacgatcagccacgccgcc
aaccgccgcatctacggccaatggacgtcgagcatcccgtcacgcttcgttagcgacctg
cccgacgaccatatcgacgtgtcgagcacgatgagcggcggcccgagcctgtggcgcgcc
gcactcggcggcggcgaccccttcgccgacgtcacccgcggggccggtcgcggccccggc
tgggcgcgcgcgacggcgatgggcggcgcgagcgtccccggccgcggcggcctccagatc
gaagcccgcgccagcgcggtcagcgtcggccagcccggccgcaaggacgtcgccgtcggc
gcccgcgtgttccactccaagttcggctacggcgcggtcgccgcgatcgagggcaacaag
ctggagatcgagttcgagaaagccgggcggaagcgtgtgctcgacagctttattgagttg
gtctga
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