Polymorphobacter sp. PAMC 29334: KZX46_18965
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Entry
KZX46_18965 CDS
T07387
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
poq
Polymorphobacter sp. PAMC 29334
Brite
KEGG Orthology (KO) [BR:
poq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
poq03009
]
KZX46_18965 (rimO)
Enzymes [BR:
poq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KZX46_18965 (rimO)
Ribosome biogenesis [BR:
poq03009
]
Prokaryotic type
ribosomal protein modification factors
KZX46_18965 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
RNase_II_C_S1
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QYE36968
LinkDB
All DBs
Position
complement(3236387..3237679)
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AA seq
430 aa
AA seq
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MVSLGCPKALVDSERILTQLRSDGYRMSPDYAGADVVLVNTCGFLDSAKAESLAAIGEAI
AENGRVIVTGCLGHEADMIRAAHPKVLAVTGPQQYADVVAAVHATAPAPKSAYLDLVPDI
GLKLTPRHYSYLKISEGCNHRCKFCIIPSIRGDLVSRPANAVVREAEKLVAGGTKELLVI
SQDTSAYGVDIGHAVSVLGGQPIRAHVVDLARALGATGAWVRLHYIYPYPHVDNLIPLMA
EGLVLPYLDIPFQHASPAVLKAMRRPANEAKVLDRIRRWRSVQPDLALRSTFIVGFPGET
EADFEYLLDWLSEAQIDRAGCFKYEAVAGAAANELPGAVPEEVKSDRWHRFMAHQSAISE
ARLAMKIGRTLDVLIDAVDEDGGASGRSKYDAPEIDGEVHLRDAGGLAVGDIVTVRVEDA
DEVDLFGVPV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgctcggctgccccaaggcgctggtcgattccgaacgcatcctgacccagctc
cggtcggacggttaccgcatgtcccccgactatgccggggccgacgtcgtgctggtcaac
acctgcggcttcctcgactcagccaaggccgagagcctcgccgcgatcggggaggcgatc
gccgagaacgggcgcgtcatcgtcacgggctgtctcggccacgaagccgacatgatccgc
gcggcgcaccccaaggtcctcgcggtgaccgggccgcagcaatatgccgatgtcgtcgct
gcggtccacgccaccgcgcccgcgcccaagtcggcgtatctcgacctcgtccccgacatc
gggctcaagctgaccccgcgccattacagctatctcaagatttcggagggctgcaaccac
cgctgcaaattctgcatcatcccgtcgatccgcggtgacctcgtcagccgcccggccaat
gcggtggtgcgcgaggcggagaagctcgttgctgggggcacgaaggagctgctcgtcatc
agccaggatacgagcgcctacggcgtcgacatcggccacgcggtgtcggtgctgggcggg
cagccgatccgcgcgcatgtcgtcgatctagcgcgggcgctcggggcaacgggcgcgtgg
gtgcggctgcactacatctacccgtatccgcacgtcgataatctgatcccgctgatggcc
gaggggctggtgctgccgtacctcgacatcccgttccagcacgcgtcaccggcggtgctc
aaggcgatgcgccgtccggcgaacgaggcaaaggtgctcgaccgcatccggcggtggcgg
agcgtgcaacccgatctcgcgctgcgctcgaccttcatcgtcggctttccgggcgagacc
gaggccgacttcgagtacctgctcgactggctgagcgaggcgcagatcgaccgcgcggga
tgcttcaaatacgaggcggtcgcgggtgcggcggcgaacgagctgcccggagccgtgccc
gaggaggtcaagtccgaccgctggcaccgcttcatggcgcaccagtcggcgatcagcgaa
gcccgccttgcgatgaagatcgggcgcacgctcgacgtcctgatcgatgcggtcgacgaa
gacggcggcgcatcgggccgctcgaagtacgacgcccccgaaatcgacggcgaggtccac
ctccgcgacgcaggcggcctcgcggtcggcgatatcgtcaccgtccgggtcgaggacgcc
gacgaggtcgacctgttcggcgtgccggtctag
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