Polymorphobacter sp. PAMC 29334: KZX46_21710
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Entry
KZX46_21710 CDS
T07387
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
poq
Polymorphobacter sp. PAMC 29334
Pathway
poq03420
Nucleotide excision repair
poq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
poq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KZX46_21710
03430 Mismatch repair
KZX46_21710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poq03400
]
KZX46_21710
Enzymes [BR:
poq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KZX46_21710
DNA repair and recombination proteins [BR:
poq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KZX46_21710
MMR (mismatch excision repair)
Other MMR factors
KZX46_21710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QYE37253
LinkDB
All DBs
Position
p29334-2:114947..116854
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AA seq
635 aa
AA seq
DB search
MTELEKALSELTPAQAAATNWVDGPLFVLAGPGSGKTRVLTTRVAKLLAETPDKSYRVMA
LTFTNKAADEMTSRIEAVVPDQRQRAIIGTFHSFCMQMLQQHGSHIGIDPDFAIYSLESD
RADLLKEAIRANGLDSDDDRFLGTIDKLKARLIQPDGCAKLFKDSGVGQRVELVYSAYEA
ALQSANALDFGSLIAQAYRLISTYPGVALHYRRAYAYWMFDEFQDTTDGQYRLIKALAGD
GFHNVFAVADDDQIIYQWNGASYKQIQRFRADFDPTEIQLPTNYRCPPSIVAAANRLVVH
NTQRTAAKQPLEAGKTTLLYPDGQHINLLRYSTEEAEATAIAAGIAGIPKGKRGQIAVLA
RTRALLERMNRALANAGVAGAIAQRRDDFRSAQFLWLAAALRLAARPADRRALDALTGAF
NRWFDLSVSSDDIAAGAEISGHSLLVEWAEAVGFVEDDQANALTGMTTALTAQPTTFRAF
IDQVLEKLPAEGGEDATDIDEDRTAWVSLVRSIGQTIGRDAGLDQFLQELALRSKEPPAP
ANAVTLMTIHSAKGKEFDHVYVIGLAEDVLPNFQSVKAGEQSAEMEEERRNCFVAITRAR
EWLCLSYADRYRGWAKQPSRFLLEMGLNLPQAVSA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggaaaaggcgctgagcgagctgacgcccgcgcaagccgcagcgacaaac
tgggtcgatggcccgctcttcgtgctggccggcccgggatcgggcaagacgcgcgtcctg
accacgcgcgtcgcgaagctcctcgccgaaacgccagacaagtcgtaccgcgtcatggcg
ctgaccttcacgaataaagcggctgacgaaatgaccagtcgaatcgaggcagtcgtgccc
gaccagcgccagcgggcgatcattggcacgtttcactccttctgcatgcagatgttgcag
cagcacggctcgcatatcggcatagatccggacttcgcgatttattcgctggagtcggat
cgggccgaccttctcaaggaagcaattcgggcgaacgggctggacagcgacgacgatcgg
ttcctgggtacgatcgacaagctgaaggcacggttgattcagccggatggctgcgcgaag
ctattcaaggacagcggcgtcgggcagcgcgtcgagctggtctatagcgcctatgaagcg
gctctccagtcggccaacgcgctcgatttcggatcgctcatcgcgcaggcctaccgcctg
atttccacatacccgggcgtcgcgctccactaccgccgcgcctacgcctattggatgttc
gacgagtttcaggacacgacggacgggcaatatcggctcatcaaagccctcgccggagac
ggcttccacaacgtgttcgcggttgcagacgacgaccagatcatctatcagtggaacggc
gcgagctataagcaaatccagcggttccgagctgacttcgacccgactgaaatccagctc
cccactaactaccgctgcccgccgagcatcgtcgccgccgcgaatcggcttgtcgttcat
aacacgcagcgcacggctgccaagcagccgctggaagcaggcaagacgacgctgctttat
ccagacggacagcatattaacctcttgcgctattcgaccgaggaggcagaggcgacggcg
atagcggctggtatcgctgggatacccaaaggcaagcgtggccagatcgcggtgctggcg
cggactcgggcgctgctcgaacgaatgaacagagcgctcgcgaatgccggggtcgccggc
gctattgcacagcgccgggacgacttccggtctgcacaatttttgtggctggccgctgca
ttgcggctcgcggcccgccccgccgatcggcgcgctctcgatgcgctaaccggcgcgttt
aatcgctggttcgaccttagcgtctcgtccgacgacatcgccgcaggcgcggaaatcagc
ggccactcgctgctcgtcgaatgggccgaggccgttggatttgtggaagacgaccaagca
aacgccctgacaggcatgacgacggcgctgaccgcccagccgacgacgtttcgcgcgttc
atcgaccaagttctcgaaaaactgcccgccgagggaggcgaggacgcgactgacatcgat
gaggaccggacggcgtgggtgtcactcgttcggagcattgggcagaccatcgggcgcgac
gcgggactcgatcaatttctacaggaattggcgctgcgctcgaaagaaccgccggctccc
gccaacgccgtcacgctcatgaccattcacagcgccaaggggaaggaattcgaccacgtc
tatgtgattggccttgccgaagacgttctacccaattttcagagcgtgaaggccggggaa
caaagcgccgaaatggaagaggagcgccgcaactgctttgtggcgatcacgcgggcgcgg
gagtggctttgcctctcctatgccgatcgctaccgggggtgggcaaagcagccctcgcgc
ttcctgctggaaatggggttgaacctgccgcaagccgtgagtgcgtga
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