Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_02025
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Entry
APT59_02025 CDS
T04267
Name
(GenBank) diguanylate cyclase
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_9
PAS_3
PAS_4
PAS_8
GAF_2
Motif
Other DBs
NCBI-ProteinID:
ALZ83039
UniProt:
A0A0U4P2K4
LinkDB
All DBs
Position
complement(436202..439708)
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AA seq
1168 aa
AA seq
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MRPLSPARIALIYLLLSALWVIGSDGLLHVLVGDQDSAYPWHTLKSLGFISLLSLVLYGL
MQRQVRHREGFIEELQTQRGTQDFIQRLTNTGDWQLLPDGRLLCSERTLVMLHQPKDSDP
LDFATVVACARVEDRDHVRSMLERLQHMQGPLNFSAHFDDGEGSWRWLNWQSDFDEAGVT
RGALVDITSHKLAEQALQDSQRRYRELVQHLPLVIFASDHRGRWQFLNPAWESLTGQPPA
QQLNHPLDQAFHPQDGARLRQLVADFAAGQRLHWNGVVRLRQSVESHRWMQMELRAGLDG
EIQGTLTDIHHDYQAQQLQQARSDVLDDLLTGLPLAEIQQGIALRLERIYPEMRVALLLD
DQGEHLRVAAAPSLPPAFQAALEGVPRGRHDQGCCSAVTGNAPVFTIDIELDPAWQVLLP
AALAAGIRGAWALPLQDEQQRAVGALGIYYGEARLPEPETQTLITEFTRLAVLAIRQQRA
VQAQRASEARYRSIFEQAYTGIMLNDLDGHWLSINHHFCQMLGYSQPELLQRDIASVTHP
EERALGAALRKQLIDTGQDRYTLEKRYLHRSGQPVWANVTTRLIRDDQGLPQYFISTAQD
ITLRKQQEESLRQAAAMFENSRDGLLLLDERRWILAVNPAFARLLGAQEGTLLGQRLGLP
SGGRQDQRFYRELWRTVRREGRWEGELLWPRLDGSTFPAWTTIDTLYPRERRQYTVTVSD
TTRLRESEARLSHLAHHDPLTDLPNRLLARTHLEHALALAEPQEYLVAVLILDFDLFRTV
NESHGHALGDELLVEFAARLRALLSEDITLARIGGDEYLVIIERLDRPEFAAQIAQAMLG
KLEQPFHLGDHDIYLSASIGISLFPDDGSTADDLIRNADTAMHQAKDQGRDTFRFYTQAL
TEQSRRRLNLESRLRMALKRGDFVLHYQPLMSVSSAQTIGVEALVRWLDPELGLIPPTEF
IPLAEETGLIVPLGDWIIESACQQMRSWLEQGLELETLAINISPRQFAKRDLASTISRAL
ARSRLPAENLELEITEGTLMDNVEEALMSLATLKTLGVRIAVDDFGTGYSSLAYLRRFPL
DKLKIDQSFMHELRSDSGTHSSQAIAAAIVALGQGLGLDVLAEGVETTEQWDILRKLGCQ
QCQGFLFSPPLPPEEFAAWYAERQRARA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctctttctcctgcgcgcattgccctgatttatctgttgctgagcgccctctgg
gtgatcggtagcgatgggctgctgcatgtcctggtcggcgatcaggacagtgcctatcct
tggcataccttgaaaagcctgggcttcatcagccttttgtcgctggtcctgtatggactg
atgcagcgacaggtcaggcatcgcgaagggttcatcgaagaactgcagacccagcgcggt
acccaggatttcatccagcgactcaccaataccggcgactggcagttgctgcccgatggc
cgcctgctctgctccgaacggaccctggtgatgctgcaccagcccaaggacagcgatccg
ctggatttcgccacggtagtggcctgcgcgcgcgtcgaggatcgcgaccatgtccgcagc
atgctcgaacgcctgcagcacatgcaggggccgctgaacttttccgcgcacttcgatgac
ggcgaaggcagttggcgctggctcaactggcagagcgacttcgacgaagctggcgttacc
cgcggtgccctggtcgacatcaccagccacaagctggccgagcaggccctgcaggacagc
cagagacgctatcgcgaactggtccagcatctgccgctggtgatattcgccagtgaccac
cgcggccgttggcaattcctcaatcccgcgtgggaaagcctgaccggtcaacctccggcc
cagcaactcaaccaccccctggaccaggcctttcatccccaggatggcgcccggctgcgc
cagctggtcgccgatttcgcggcgggtcagcgcctgcattggaacggcgtggtgcggctg
cggcagtcggtggaaagccaccgctggatgcagatggaattgcgcgccggcctcgatggc
gaaatccagggcaccctgaccgacattcatcacgactaccaggcgcagcagttacagcag
gcccgcagcgacgtgctcgacgacctgctcaccggcctgccgttggcggagatccagcag
ggcatcgccttgcggctggaacgcatctatcccgagatgcgcgtcgccctgctgctggac
gatcagggcgagcacctgcgcgtcgccgcggcgcccagcctgccgcccgcctttcaggcg
gcgctggaaggtgtcccccgcggtcgccacgaccagggctgctgttccgccgtcaccggc
aatgcccccgtgttcaccatcgacatcgaactggatccggcctggcaggttctgctaccg
gcagccctggcggcgggcattcgcggcgcctgggcactgcccctgcaggacgagcaacag
cgcgccgtgggcgcgctggggatctactatggcgaggcgcggctacccgagccggaaacc
cagaccctgatcaccgagttcacccgcctggcggtgctggccattcggcaacagcgcgcc
gtccaggcccagcgagccagcgaagcccgctaccgcagcatcttcgaacaggcctatacc
ggcatcatgctgaatgacctggacggccactggctgagcatcaatcatcacttctgccag
atgctcggctattcgcaaccggaattgctgcaacgcgacatcgcctcggtgactcatccg
gaagagcgtgccctcggcgccgcgttgcggaaacagctgatcgataccggccaggatcgc
tacaccctggaaaaacgctatctgcatcgcagcggccagccggtgtgggccaacgtcacc
acccggctgatccgcgatgatcagggtctgccgcagtatttcatcagtaccgctcaggac
atcaccctgcgcaaacagcaggaggagagcctgcgccaggctgcggcgatgttcgagaac
agtcgcgatggcctgctgctgctcgacgaacgtcgctggatcctggcggtgaatccggcc
ttcgcccggctgctgggcgcccaggagggcaccctgcttggccagcgtctcgggctgccc
agcgggggccggcaggatcagcgcttctatcgcgagctttggcgcaccgtacgccgcgag
ggtcgctgggaaggcgaactgctctggcctcgcctggatggcagcaccttcccagcctgg
accaccatcgacaccctctacccccgggaaagacggcaatacacggtcacggtcagcgat
accacccggctgcgggagagcgaggcgcgcctgagtcacctcgcccaccacgatccgctg
accgacctgcccaaccgcctgctggcgcgtactcatctcgaacacgcgctggcccttgcg
gaaccccaggaatacctggtcgccgtgctgatcctcgacttcgacctcttccgcacggtc
aatgaaagccatggccatgccctgggcgacgagctgctggtggaattcgccgctcgcttg
cgcgccctgctcagcgaggacatcaccctggcccgcatcggcggtgatgagtacctggtc
atcatcgagcgcctggaccgccccgaattcgccgcccagatcgcccaggcgatgcttggc
aagctggagcagcccttccacctgggcgaccacgacatctacctcagcgccagcatcggc
atcagtctcttccccgacgatggcagcaccgccgacgacctcatccgcaatgccgacacg
gccatgcaccaggccaaggatcagggtcgcgataccttccgcttctatacccaggctctc
accgagcagtcacggcgccggttgaatcttgaatcgcgactgcgcatggcgctcaagcgc
ggtgatttcgtcctacattaccaaccgctgatgagcgtgagttcggcccagaccatcggc
gtggaggccctggtgcgctggctggacccggaactggggctcatcccgcctaccgagttc
attcccctggccgaagagaccgggctcatcgtgccgctgggcgactggatcatcgaaagc
gcctgccagcagatgcgcagctggctggagcaggggctggaactggagaccctggcgatc
aacatctcgccccggcaattcgccaagcgtgacctggccagcaccatctcccgcgccctg
gcgcgcagtcgcctgcccgccgagaacctggaattggagatcaccgaaggcaccctgatg
gacaacgtcgaggaagcgctaatgtccctggcgaccctcaagacgctcggggtgcgtatc
gccgtggacgactttggcaccggctactcctcgctggcctacctgcgccgctttccgctc
gacaagctcaagatcgatcagagcttcatgcacgaactgcgcagcgacagtggtacccac
agcagccaggccatcgccgcggccatcgttgccctgggccagggcctgggcctggacgtt
ctggccgaaggggtggagaccaccgaacaatgggacatcctgcgcaagctgggctgccag
cagtgccaaggtttcctgttcagtccgccgttgcctcccgaagagttcgccgcctggtat
gccgagcggcaacgcgcacgcgcttag
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