Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_02355
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Entry
APT59_02355 CDS
T04267
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
por03016
]
APT59_02355
Enzymes [BR:
por01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
APT59_02355
Transfer RNA biogenesis [BR:
por03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
APT59_02355
Prokaryotic type
APT59_02355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
ALZ83095
UniProt:
A0A0U4VJ39
LinkDB
All DBs
Position
511541..512455
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AA seq
304 aa
AA seq
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MAQVKRIRRQVHGVLVLDKPRGFSSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYSTVAQLGVTTTTGDAEGEVLERRTVDVDEAAIQAALPAFRGQIE
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTIARLELLALQEDRATLEVACSKGTYV
RTLVEDLGARLGCGAHVAELRRTQAGPFGLVQAISLDELEAAHAEGGAEALDRFLLPVDS
GLEHWPLVQLTQHSAYYWLHGQPVRAANAPKFGLMRVQDDQGRFIGIGEIDDEGQVAPRR
LIRS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtattcgccgccaggtgcatggcgtactggtgctggacaagccg
cgcggcttttcctccaacgccgcgctgcaaaaggtccgctggctgctcaacgctgagaag
gcgggccataccggcagtctggatcccctggctaccggtgtgctgccgctgtgcttcggc
gaagcgaccaagttttcccagtacctgctggacgccgacaagggttacagcaccgtggcg
cagctgggcgtcaccaccaccaccggcgacgccgagggtgaggtgttggagcgacggacg
gtcgatgtcgacgaagcagccatccaggcggcgctgccggcgtttcgcggccagatagag
cagattccgccgatgtactcggcgctcaagcgcgacggtcagccgctctacaagttggcg
cgtgccggggaagtagtggagcgcgaggcgcgttctgttactattgcccgtctggaactc
ctggcgttgcaggaagatcgcgcgacgctggaagtggcctgcagcaaggggacctatgtg
cgcaccctggtcgaagacctcggcgcccgtctcggttgcggggcccatgtggctgagttg
cgacgtacccaggctggtccctttggcctcgtgcaggccatcagcctggacgagctggag
gcggcccatgccgaaggcggtgccgaagcgctggatcgcttcctgctgccggtcgacagc
ggcctcgaacattggccgctggtgcagttgactcagcacagcgcctattattggttgcac
ggtcagcccgttcgggcagccaatgcaccgaaattcggtttgatgcgggtgcaggacgac
caaggtcgtttcatcggcatcggcgagatagatgacgaggggcaggttgctccccgtaga
ctgattcggtcctag
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