Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_02825
Help
Entry
APT59_02825 CDS
T04267
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
por03400
]
APT59_02825
Enzymes [BR:
por01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
APT59_02825
DNA repair and recombination proteins [BR:
por03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
APT59_02825
Prokaryotic type
APT59_02825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
AAA_28
BIR
Motif
Other DBs
NCBI-ProteinID:
ALZ83180
UniProt:
A0A0U4WFQ3
LinkDB
All DBs
Position
complement(606527..607948)
Genome browser
AA seq
473 aa
AA seq
DB search
MSQLVWFRTDLRTHDHPALHAAAEQGQVVAVFLLSPAQWREHDEAAVKVDFWLRNLAKLR
ETLKTLGIPLLIRRAERWEQAPQVLLDLAREQGLEHLHFNDEYGVNEAARDDAVAEAFEQ
AGLTAHRYLDQTLFAPGTVLTKSGGYFKVFGQFRKTCLARLETGLPMPLPAPDRQQAATI
QADELPTGVDGFAETSPEVRQLWPAGEEAALQRLEAFIRDDLEDYHQARDIPFEPGTSQL
SAYLNAGVLTPRQCLQAAVNANDGLLSGGRQGAATWITELLWREFYRHVLVGYPWVSRNQ
PFNRDLAALPWRDDPEGLAAWQQGRTGIPLIDAAMRQLLQTGWMHNRMRMLTAMFLCKNL
LIDWREGERWFMRHLIDGDLASNNGGWQWSASTGTDSVPYFRVFNPHTQAMKIDARGDYV
RTWVPELAGLRGKAVHTPGERYLPPLVDLGESRQRALATYRGMARKAETKKPD
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagccagctcgtctggttccgtaccgacttgcgtacccatgaccatcccgccctgcat
gctgccgctgaacagggacaggtcgtcgccgtctttctgctgagtcctgcccagtggcgg
gaacatgacgaggccgcggtcaaggtcgacttctggttgcgcaacctcgccaagctgcgc
gagacgctcaagacactgggcatccctctgctgatccggcgtgcggagcgctgggagcaa
gcgccccaggtgctgctcgacctggccagggaacagggtctcgaacatctgcatttcaac
gacgaatacggggtgaacgaagccgcccgggatgacgccgtggctgaggcgttcgagcag
gcgggccttactgcccaccgctatctggaccagaccctgttcgcccccggtacggtattg
accaagagcggtggctatttcaaggtcttcgggcaattcaggaagacgtgccttgcgcgc
ctggaaacgggcttgccgatgcccctgccggcgccggaccggcagcaggccgccaccatt
caggcggatgagctgcccaccggggtcgacggcttcgccgagacatcgcccgaggtgcga
cagctgtggccggcgggtgaagaggcggcgctccagcggctggaggccttcatccgggac
gatctggaagactatcaccaggcccgggacatcccgttcgaaccgggtaccagtcagctg
tcggcctatctgaatgcaggagtgctgacaccacggcagtgcctgcaggccgcggtcaac
gccaacgacggcctgctcagtggcggtcgccagggtgcggctacctggatcactgaattg
ttgtggcgcgaattctatcgccatgtcctggtgggctatccctgggtttcgcgcaaccaa
cccttcaatcgggaccttgccgccctgccctggcgtgatgaccctgaaggcctcgccgcc
tggcaacaggggcgcaccggcattcccctcatcgatgcggccatgcgtcagctgctgcag
acgggctggatgcacaatcgcatgcgcatgctgaccgccatgttcctctgcaagaatctg
ctgatcgactggcgcgagggcgagcgctggttcatgcgtcatctcatcgatggcgacctg
gcctccaacaatggcggctggcagtggagcgcctcgacgggtaccgattcggtgccctac
ttccgggtgttcaatccccatacccaggccatgaagatcgatgcacgcggtgattatgtg
cgcacctgggtgccggagctggccgggctgaggggcaaggccgtgcacaccccgggggag
cgctatctgccaccgctggtggacctgggcgaaagccgccaacgggcgctagccacctac
cgcggcatggcgcgcaaggcggaaacaaaaaagccggactag
DBGET
integrated database retrieval system
