Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_03140
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Entry
APT59_03140 CDS
T04267
Name
(GenBank) fimbrial protein
KO
K02666
type IV pilus assembly protein PilQ
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
por02044
]
APT59_03140
02035 Bacterial motility proteins [BR:
por02035
]
APT59_03140
Secretion system [BR:
por02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
APT59_03140
Bacterial motility proteins [BR:
por02035
]
Pilus system
Pilus assembly proteins
APT59_03140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
AMIN
Secretin_N
STN
type_II_gspD_N0
DUF5004
DUF4813
Motif
Other DBs
NCBI-ProteinID:
ALZ83236
UniProt:
A0A0U4WVL5
LinkDB
All DBs
Position
672136..674385
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AA seq
749 aa
AA seq
DB search
MGGASTVKTNSARRLGLGLALLLGSLAGQALAADLQALNVASLPGDRIELKLTFDQPVPV
PKGYTIEQPARIALDLPGVANKLGTKSRDLGNGNARSVTVVEAGNRTRLIINLTNLASYD
TRADGRNLFVTIGGTAGRQAATAQANLTPNLPRAAAPATVTAPAPAPLPGAVTRTPLPPT
QATSTVAAMTAPRPQLRGKAIRHIDFQRGPQGEGNVVIDLSETGINPDIQEQGGKIRLTF
AGTQLPEELRVRLDVKDFATPVQFVNASADSSGASIVIEPTGTYDYLAYQTNNRLTLSVK
PLTTEEKEKRAADRFTYTGEKLSLNFQDIDVRSVLQLIADFTNLNLVASDTVQGNITLRL
QNVPWDQALDLILKTKGLDKRQIGNVLLVAPADEIAARERQELESQKQIQQLAPLRRDLI
QVNYAKAADIAKLFQSVTSADKTADERGSISVDERTNSIIAYQTQNRLDELRRIVSQLDI
PVRQVMIEARLVEANVDYSKQLGVRWGGNSTSGNFAVYGKDGATTVDPTTRQVFLPGSST
VGNFTSTNGVAPTPFVDMGVAGSTSGIGIGFMAGGHMLDLQLSALQSSGNGEIISQPKVV
TSDKETAKILRGTEIPYQEASSSGATSTSFKQAALSLEVTPQITPDNRIIMEVKVNKDAP
DYQNALNGVPPISKNEVNAKVLVSDGETIVLGGVFSNTQTKSTTKVPMLGDIPYVGRLFR
RDSVTDSKVELLIFLTPRIMNNQAIAVGR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggcaagtacagtgaagacgaatagcgcaagacggctgggactgggattggcc
ttgttgctgggcagcctggccggccaggccctggcagccgatctgcaggccttgaacgtc
gcctccctgcccggggatcgcatcgagctcaagctgaccttcgatcagccggtcccggta
cccaagggctacaccatcgagcagccggcgcggatcgccctggacttgccgggggtggcc
aacaagctgggcaccaagagccgcgacctgggtaacggcaatgcccgtagcgtgacggtg
gtagaggcgggcaaccggacccggctgatcatcaacctcaccaacctggccagctacgac
acccgcgccgatggccgcaatctgttcgtcaccatcggtggcaccgccggtcgtcaggca
gctaccgcccaggccaacctgacgccgaatctgccgcgcgccgccgctccagccaccgtg
accgcaccggcgccagcgcctctgccaggcgctgtcacccgcacgccgctgccgccgact
caggccacctccaccgtcgccgccatgaccgcgccccgcccgcagctgcgtggcaaggcg
atccgtcatatcgacttccagcgtggcccccagggtgagggcaacgtggtcatcgacctg
agcgagaccggcatcaacccggatatccaggaacagggcggcaagatccgcctgaccttt
gccggcacccagttgccggaagagttgcgggtacggctggacgtcaaggacttcgccact
ccggtgcagttcgtcaatgcctcggccgacagcagtggcgcgagcatcgtcatcgagcct
accgggacctacgattacctggcctaccagaccaataaccgcctgaccctgagcgtcaag
ccgctcactaccgaagagaaggaaaagcgcgcagccgatcgcttcacctacaccggtgaa
aagctgtcgctgaatttccaggacatcgatgtgcgctcggtgctgcagttgatcgccgac
ttcaccaacctcaacctggtggcgagcgacaccgtgcagggcaacatcaccctgcgcctg
cagaacgtgccttgggatcaggcgctggatctgattctcaagaccaaggggctcgacaaa
cgccagatcggcaatgtgctgctggtggccccggccgacgagatcgctgcccgcgaacgc
caggagctggagtcgcagaagcagatccagcagctggcgccgctgcgccgtgatctgatc
caggtcaactacgccaaggccgccgatatcgccaagctgttccagtcggtgaccagtgct
gacaagaccgccgacgagcgcggctccatctcggtggacgagcgcaccaacagcatcatc
gcctaccagacccagaatcgcctggatgaactgcgccgtatcgtctcgcagctggatatc
ccagtgcgccaggtaatgatcgaggcgcgcctggtggaagccaacgtcgactacagcaag
cagctgggcgtgcgctgggggggtaactccacgtcgggcaacttcgccgtctacggcaag
gacggcgccaccaccgtcgatcccactactcgtcaggttttcctgccgggtagcagtacc
gtgggtaacttcacttctaccaacggcgtggcccctacgcccttcgtggatatgggtgtc
gccggtagcacctcgggtatcggcatcggcttcatggccggtggccatatgctggacctg
cagctgtccgccctgcagtccagcggcaacggcgaaatcatctcccagcccaaggtggtc
acctcggacaaggagaccgcgaagatcctgcgcggtaccgagattccctatcaggaagcc
agttccagtggcgcgaccagcaccagcttcaagcaggcagccctgtcgctggaggtcacg
ccgcagatcacgccggacaaccgcatcatcatggaggtcaaggtcaacaaggatgcccct
gactaccagaacgccttgaatggtgtgccgccgatcagcaagaacgaggtcaatgccaag
gtgctggtgagcgatggcgagaccatcgtgctgggcggggtgttctccaatacccagacc
aagtccaccaccaaggtgccgatgctgggcgatattccttatgtcggccggttgttccgc
cgggattcggtcacggacagcaaagtcgagctgctgatcttcctcacgccgcgtatcatg
aacaaccaggcgatagcggttggtcgatga
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