Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_03225
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Entry
APT59_03225 CDS
T04267
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
por03009
]
APT59_03225 (rsmD)
Enzymes [BR:
por01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
APT59_03225 (rsmD)
Ribosome biogenesis [BR:
por03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
APT59_03225 (rsmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_31
UPF0020
Methyltransf_25
MTS
MethyltransfD12
Methyltransf_37
Methyltr_RsmB-F
TRM
N6_Mtase
PrmA
N6_N4_Mtase
Methyltransf_24
RsmJ
FtsJ
Methyltransf_ANTKMT
Motif
Other DBs
NCBI-ProteinID:
ALZ83252
LinkDB
All DBs
Position
complement(694654..695223)
Genome browser
AA seq
189 aa
AA seq
DB search
MAQKPANQLRIIGGDWRSRRFAFPDALGLRPTPDRVRETLFNWLAVVTPGARVLDPFAGS
GALLLEALSRGAGQALAFDLNAQAVNALRGHLQTLGCAHAEVRQTDALQALAKPVETPFD
LVFLDPPFGKDLLEPACAALETQGWLAADAWIYTESETQPSRLTLPATWQLHREKKTGNV
HYALWHRQA
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaagcccgccaaccaactgcgcatcatcggtggcgactggcgcagccggcgc
ttcgcctttcccgatgccctgggcctgaggcccaccccggatcgggtgcgcgagaccctg
ttcaactggctggccgtggtgacgcccggcgcccgagtcctggaccccttcgccggcagc
ggtgcgctgctgctggaagccctctcccgcggtgccggtcaggccctggccttcgacctc
aacgcccaggcagtcaatgccctgcgcggtcatctgcagaccctgggctgcgcgcacgcc
gaggtacgccagaccgatgccctccaggcgctggccaagccggtggagacgcctttcgac
ctggtgtttctcgacccgccctttggcaaggacctgctggagccggcctgcgcggcgctg
gaaacccagggctggctcgccgcagacgcctggatctacaccgagagcgaaacccagccc
tcccggctgaccctgcccgcgacctggcagctgcaccgcgagaaaaagaccggcaacgtc
cactacgccctctggcaccgccaggcgtga
DBGET
integrated database retrieval system
