Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_03570
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Entry
APT59_03570 CDS
T04267
Name
(GenBank) diguanylate cyclase
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_8
PAS_3
PAS_7
PAS_10
Motif
Other DBs
NCBI-ProteinID:
ALZ83321
UniProt:
A0A0U4XQ81
LinkDB
All DBs
Position
complement(771428..775615)
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AA seq
1395 aa
AA seq
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MNSPPSTLPEEPVAPSSRRLTRGLLILSLVAMLALMFWQAFASMAERQALRREQLEGLTR
QLANTLEFGLALKAQAVRSTLRWSLDPTLPLAPNLLLSLKDFFPGLQQVRWLPANAALRT
ARLDDSADAAFIQQLIARSGQADFSYGYNAAATTAPLYVLLAGDPELQQGWWVLTSAPRL
EPLWRSTRVPTGLDWRLEDRTRGTLLFHSGATAATAGEVIQPLAYSDWQVVGAYPAETPS
ESLLEASSGRLLLFSLSGLVTAILIYLLLREEQGLRALTLASRRSLRLASTALNGIEEFV
CMTQADGRLVYVNATAARLLGIAADDAQQYFLASLLPQLVALTPAERDGGALITLRVASQ
PRRFAVSCHALADSQSSVRVLRDRTQTQDGFVWVLRDVTEQQRNLETIQTTRQRYENIFN
GVHTGICVVDLSAVQPCMTALGLERPEQLAELFARQPEALDALGRQVRITEINQRALEML
GIDHLDQAWDRLVGESRVQVGGKRYRLLAGLLSGQQVLELETRISTAEGERHLWLSMHLP
ADPQHLDATLLSLNDITQRKLGELRLLERDAFWSNLISAIPDTLYTYDVTSGELTYESHS
LARKLGYPPEAFVSFGPARLHPDDVELHARVVSMRPTLSDRPCSSLLRWQHRNGGWRWFD
VREQRLASRPDGTAASVVGLALDVTDMVRASDRLRDSENRYRQLAESISDVIFTTDAQLV
LNYLSPSVEELLGYPLAELQQRTLAELVVHSRQLQEVRRTLQRLLRSLDDPRALAELRRE
RFAPLVLDCLHAQGHTLQIELRLKPLWDDHERFAGLLGICRDISAQRRTDKDMRMAATVF
DHSAGAILVTDPAGYIVRVNRTFTRITGFSPEEVFDQQPMMLCADKQEANQLQHVMQQLR
TEESWEGELWQRRQDNEPYPSWVGITAIRDDDGDLMSYVCFFVDISERKASERRIHRLAY
YDALTLLPNRTLFQDRLHNALQQSRHNESWVVLMFLDLDRFKPINDSLGHAAGDRLLKEV
AMRLTACVGTEDSVARMGGDEFTLLLSGLETRETALAQAIRVGEQILAQLSEAFILEGRE
FFVSASIGIALSPQDGQELSQLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELEA
DLRHALLQGEFRLHYQPQYRCDTRRLTGVEALLRWEHPVRGNVPPTEFIPVLEEIGLVVQ
VGDWVIREACRQMREWHAAKVRIPKVSVNLSARQFGDGQLGQRIAQILAETGLAPACLEL
ELTESILMRDVGEALQLLGELKGLGLCIAVDDFGTGYSSLNYLKQFPIDILKIDRSFVDG
LPHGEQDAQIARAIIAMAHSLNLSVIAEGVEETAQLDFLCTHGCDEVQGYLFDRPLPPEQ
LRQRLEHQGLFPVLT
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagcccgccctccacgctgccggaagagccggtagccccctcctcgcgacgcctg
acccgcggcctgctgatcctgtcgctggtggccatgctcgcgctgatgttctggcaggcc
ttcgccagcatggccgagcgtcaagccctgcgccgcgaacagctggaaggcctgacccgg
caactggccaacaccctcgaattcggcctggcgctcaaggcccaggcggtgcgcagcacc
ctgcgctggtcgctggaccccaccctgccgctggcacccaatctgctgctcagcctcaag
gatttctttcccggtctgcagcaggtgcgctggttgccggccaatgccgccttgcgcacc
gcgcggctggacgactccgcggatgccgccttcatccagcagttgatcgcacgcagcggc
caggctgacttcagctatggctacaacgccgcggctaccaccgcacccctctatgtcctg
ctggctggcgatccggagttgcagcagggctggtgggtgctgaccagcgccccgcgcctc
gaaccgctctggcggtcgacccgcgtgcccacgggcctcgactggcgcctggaggatcgc
acccgtggcaccctgctgttccacagtggcgcgaccgccgccaccgccggcgaggtgatc
cagccgctggcctacagcgattggcaggtggtgggcgcctatcccgccgagacgccgtcg
gagtcgctgctggaggcctcctctggccggctgctgctgttcagcctgtccggcctggtg
accgccatcctgatctacctgctcctgcgcgaagagcagggtctgcgggccctgaccctg
gcctcgcgacgcagtctgcgcctggcgagcaccgcactgaacggtatcgaggaattcgtc
tgcatgacccaggccgacggtcgcctggtctatgtcaacgccaccgccgcccgcctgctg
ggcatcgctgcggacgacgctcagcaatatttcctcgccagtctgctcccccagctggtt
gccctgacgccggccgagcgggacggcggcgccctcatcacgctccgggtggcgagccag
ccgcgtcgcttcgcggtcagctgtcatgccctggcggacagccagtccagcgtgcgcgtc
ctgcgcgaccgcacccagacccaggacggcttcgtctgggtgctgcgcgacgtcaccgaa
cagcagcgcaacctggaaaccatccagaccacccgccagcgctacgagaacatcttcaac
ggggtgcacaccggcatctgcgtggtggacctgagcgccgtgcagccctgcatgaccgcc
ctgggcctggagcggcccgaacaactggcggagctgttcgcccgccagcccgaggcgctg
gatgccctgggtcgccaggtgcgcatcaccgagatcaaccagcgcgccctggaaatgctc
ggcatcgaccacctcgaccaggcctgggaccggctggtgggcgagtcccgtgtccaggtc
ggcggcaagcgctaccgcctgctggccggcctgctctccggccagcaggtgctggaactg
gagacccgcatcagcaccgccgaaggcgagcgccatctctggctgagcatgcacctgccg
gccgatccccagcacctcgacgccaccctgctcagcctcaacgacatcacccagcgcaag
ctcggcgaattgcgcctgctcgaacgcgacgccttctggtccaacctgatcagcgccatt
cccgacaccctctatacctatgacgtgaccagcggcgaactcacctacgagagccattcg
ctggcgcgcaagctcggctatccgccggaagccttcgtcagcttcggccctgcgcgcctg
cacccggacgacgtcgaactgcatgcccgggtggtgagcatgcggcccacgctctccgat
cgcccctgcagcagcctcttgcgctggcagcaccgcaacggtggctggcgctggttcgac
gtgcgcgagcagcgtctcgccagccgcccggacggcaccgctgccagcgtggtcgggttg
gccctggacgtcaccgacatggtgcgcgccagcgatcgcctgcgcgacagcgagaatcgc
taccgccagttggcggaaagcatcagcgacgtcatcttcaccaccgacgcccagctggtg
ctcaactacctcagcccctcggtcgaggagctgctcggctatccgctcgccgagttgcaa
cagcgtaccctggccgagctggtggtccactcgcgtcagctgcaggaggtccgccggacc
ctgcagcggctgctgcgcagcctggacgacccccgcgccctggccgaactgcgccgcgag
cgcttcgcgccgctggtgctcgactgcctgcacgcccagggtcataccctgcagatcgag
ctgcgcctcaagccgctgtgggacgaccacgagcgcttcgccggcctgctcggcatctgc
cgcgacatctccgcccagcgtcgtacggacaaggacatgcgcatggcggccacggtgttc
gatcactcggccggcgccatcctggtcaccgacccggccggctacatcgtgcgggtcaac
cgcaccttcacccgcatcaccggcttcagccccgaagaggtgttcgaccagcagccgatg
atgctctgcgccgacaagcaggaggccaaccagctgcaacacgtgatgcagcaactgcgc
accgaggagagctgggaaggcgaactctggcagcgccgccaggacaacgagccctatccc
tcctgggtcggcatcaccgccatccgcgacgacgacggcgacctgatgagctacgtctgc
ttcttcgtcgacatcagcgaacgcaaggccagcgaaaggcgtatccaccgcctggcctac
tacgacgccctgaccctgctgcccaaccgcaccctgttccaggaccgcctgcacaacgcc
ctgcagcagagccgccacaacgagagttgggtggtgctgatgttcctcgacctggatcgc
ttcaagccgatcaacgacagcctcggccacgccgccggcgaccgcctgctcaaggaagtg
gccatgcgcctgaccgcctgcgttggcaccgaggacagcgtggcgcgcatgggcggcgac
gaattcaccctgctgctgtcgggcctggagacccgcgaaacggccctcgcccaggcgatc
cgtgtcggcgagcagatcctcgcccagctgtccgaggccttcattctcgaaggccgcgaa
ttcttcgtttccgccagcatcggcatcgccctgtcgccccaggacgggcaggaactcagc
cagctgatgaagaacgccgacaccgccatgtaccacgccaaggagatgggcaagaacaac
ttccagttctaccaggccgagatgaacgcccgcgccctggagcgcctggaactggaggcc
gacctgcgccacgccctgttgcagggcgaattccgcctgcactaccagccgcagtatcgc
tgcgatacccgccgcctgaccggagtcgaggccctgttgcgctgggagcacccggtgcgc
ggcaacgttccgccaacggaattcattccggtgctggaagagatcggcctggtggtccag
gtaggtgactgggtgatccgcgaggcctgccggcagatgcgcgagtggcacgcggccaag
gtgcgtatccccaaggtctcggtgaacctgtccgcccgccagtttggcgacggccagctc
ggccagcgcatcgcccagatcctcgccgagaccggcctggcgccggcctgcctggaactg
gagctgaccgaaagcatcctgatgcgcgacgtcggcgaagccctgcagctgctcggcgaa
ctcaaggggctggggctgtgcatcgcggtggacgacttcggtaccggctactcgtcgctc
aactacctcaagcagttccccatcgacatcctcaagatcgatcgcagcttcgtcgacggc
ctgccccatggcgagcaggacgcccagatcgcccgcgccatcatcgccatggcccacagc
ctcaatctctcggtgatcgccgagggggtggaggaaaccgcgcagctggatttcctctgc
acccatggttgcgacgaggtccagggctacctgttcgatcgtccgctgccgccggagcag
ttgcgccagcgcctggagcaccagggtctgttccccgtcctgacatga
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