Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_03715
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Entry
APT59_03715 CDS
T04267
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
por03400
]
APT59_03715
DNA repair and recombination proteins [BR:
por03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
APT59_03715
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
AAA_16
Lon_C
AAA_22
DnaB_C
SLFN-g3_helicase
GvpD_P-loop
AAA
Rad51
nSTAND_NTPase5
nSTAND3
NTPase_1
AAA_14
AAA_24
RecA_N
NACHT
MCM
AAA_5
ABC_tran
zf-C2H2_6
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ALZ83349
UniProt:
A0A0U4W5Y6
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Position
806299..807660
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AA seq
453 aa
AA seq
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MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETVVETSAVPSGRAGWAGAQATIKTL
AEVSVEETPRFTTDSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCHLAARMPAL
YVTGEESQQQVAMRARRLGLPEDKLKVMTETCIETIVATARQEKPRVMVIDSIQTIFTEQ
LQSAPGGVAQVRESAALLVRFAKQTGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFEGE
SDGRLRMLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLNRAQEAVAGSVVMATWEG
SRPMLVEVQALVDTSHLANPRRVTVGLDQNRLAMLLAVLHRHGSIPTYDQDVFINVVGGV
KVLETAVDLALMSAVISSLRDRALPHDLLVFGEIGLSGEIRPVPSGQERLKEAAKHGFKR
AIVPKGNAPKDPPPGLQVVAVTRLEQALDALFE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgtctctacggctgcaccgagtgtggcgccacctttcccaagtgg
gcgggccagtgcggcgagtgcggtgcctggaataccctggtggaaaccgtcgtcgagacc
tccgccgtgccctccggtcgcgccggctgggctggagcccaggcgaccatcaagaccctg
gctgaggtcagcgtcgaggaaaccccgcgcttcaccaccgactccaccgaactcgaccgc
gtactgggtggcggtctggtggatggctccgtggtgctgatcggcggcgatccgggcatt
ggcaaatccaccatcctgctgcagaccctctgccacctggccgcgcgcatgccggcgctc
tatgtcaccggtgaggagtcccagcagcaggtggcgatgcgcgcccggcggctgggcctg
ccggaagacaagctcaaggtcatgaccgagacctgcatcgagactatcgtcgccaccgcg
cgccaggaaaagccgcgggtcatggtgatcgactccatccagaccatcttcaccgagcag
ctgcagtccgcacccggcggggtggcccaggtgcgcgagagcgcggcgctgctggtgcgc
ttcgccaagcagaccggtaccgccatcttcctggtcggccacgtcaccaaggaaggcgcc
ctggctggcccccgggtgctggagcacatggtcgacaccgtgctctatttcgagggtgag
tccgacgggcgcctgcgcatgctgcgggcggtcaagaatcgctttggcgcagtcaatgag
ctgggcgtgttcggcatgaccgacaagggtctcaaggaggtttccaacccctcggcgatc
tttctcaatcgcgctcaggaggccgtggccggcagcgtggtcatggcgacgtgggagggt
tcgcggcccatgctggtggaggtgcaggcgctggtggacaccagtcacctggccaatccg
cggcgggtcaccgtgggcctggaccagaatcgcctggccatgctgctggccgtgctgcac
cgtcatggcagcattcctacctacgaccaggacgtcttcatcaacgtggtcggcggggtc
aaggtactggagacggcggtggacctggcgctgatgtcggcggtgatctccagtctgagg
gaccgcgccctgccgcatgatctgctggtgttcggcgagatcggcctgtccggcgagatc
cggccggtgcccagtggccaggagcgcctcaaggaggctgccaagcacggtttcaagcgc
gccatcgtgcccaagggcaatgcgcccaaggatccgccgcccggtctgcaggtggtggcg
gtgacccggctggagcaggcactggatgcgctgttcgaatag
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