Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_04100
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Entry
APT59_04100 CDS
T04267
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
por03009
]
APT59_04100
Enzymes [BR:
por01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
APT59_04100
Ribosome biogenesis [BR:
por03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
APT59_04100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ALZ83423
UniProt:
A0A0U4P3Q0
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All DBs
Position
892864..893478
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AA seq
204 aa
AA seq
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MSRNPRFTPGPRPRRQAKAPPATPRLLLLNKPFDVLTQFADADGRATLKAFVEVPGVYPA
GRLDRDSEGLLLLTNDGQLQARIADPRHKLPKTYWAQVEGTPSEEQLQRLRQGVELNDGP
TLPAEAHLLAEAPVLWERDPPVRFRKSVPTAWIELTIREGRNRQVRRMTAAVGLPTLRLV
RVRIGPWTLDDLAPGQWREVPTSL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaaatcctcgcttcacccccggcccccggcctcgccgtcaggccaaggcgccc
ccggccacgccgcggctgctgctgctcaacaagcccttcgatgtgctcacccagttcgcc
gatgccgacggccgcgcgaccctgaaggccttcgtcgaggtgccaggcgtctatcccgcg
ggccgtctggatcgtgacagcgaaggtctgctgctgctcaccaacgatggccagctgcag
gcgcgcatcgccgatcccaggcacaagctgcccaagacctattgggcacaggtggagggc
acgcctagcgaagagcagttgcagcggctgcgccagggcgtcgaactcaatgatggtccc
accctgccagccgaggcgcacctgctggccgaagcgccggtgctctgggagcgcgatccg
ccggtgcgttttcgcaagagcgtgccgaccgcctggatcgagctgaccattcgcgaaggt
cgcaatcgtcaggtgcgccgcatgacggccgccgtgggcctgccgacgctacggctggta
cgggtgcgtatcgggccctggacgctggacgatctggcgccgggtcagtggcgcgaggtg
cccacgtccctgtag
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