Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_04470
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Entry
APT59_04470 CDS
T04267
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
por00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
APT59_04470 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
por03019
]
APT59_04470 (rnc)
03009 Ribosome biogenesis [BR:
por03009
]
APT59_04470 (rnc)
03036 Chromosome and associated proteins [BR:
por03036
]
APT59_04470 (rnc)
Enzymes [BR:
por01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
APT59_04470 (rnc)
Messenger RNA biogenesis [BR:
por03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
APT59_04470 (rnc)
Ribosome biogenesis [BR:
por03009
]
Eukaryotic type
90S particles
RNase
APT59_04470 (rnc)
Prokaryotic type
rRNA processing factors
APT59_04470 (rnc)
Chromosome and associated proteins [BR:
por03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
APT59_04470 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
ALZ83494
UniProt:
A0A0U4W169
LinkDB
All DBs
Position
983151..983840
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AA seq
229 aa
AA seq
DB search
MTLSLDRLERRLGYTFKDPDLMLLALTHRSFAGRNNERLEFLGDAILNFIIGEALYDHFP
QAREGQLSRLRAKLVKGETLALLARSFELGDYLRLGSGELKSGGFRRESILADAMEALIG
GIYLDAGMDAAKDRVMAWLGPQLRELTPVDTNKDPKTRLQEFLQARACDLPRYEVVAIEG
EPHCRVFFVECEIAMLNEKTTGQGASRRIAEQIAASAALIALGVENGHE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgactttatctctagatcgcctcgagcgtcggctgggttataccttcaaggacccggac
ctgatgctgctcgcccttacgcaccgcagctttgccggtcgtaacaatgaacgccttgaa
ttcctcggcgacgccattctcaacttcatcatcggtgaagccctctacgatcacttcccc
caggctcgcgaaggccagctgtcccgtttgcgggccaagctggtgaaaggcgagaccctg
gcgctgctcgcccgcagcttcgaactgggcgactacctgcgcctggggtccggtgagctg
aaaagtggtggctttcgccgcgagtccatcctggccgatgccatggaagccctgatcggc
ggcatctatctggatgccggcatggatgccgccaaggaccgggtcatggcctggctcggc
ccccagttgcgcgagctgacgccggtggataccaacaaggatcccaagacccgactgcag
gagtttctccaggcacgtgcctgtgacctgccgcgctacgaagtggtcgccatcgaaggc
gaaccgcactgccgggtcttctttgtcgaatgcgagatcgccatgctcaatgaaaagacg
acagggcagggcgccagccgccggatcgccgaacagatagccgcctcggcggccttgatc
gccctgggcgtggagaatggtcatgaatga
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