Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_04885
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Entry
APT59_04885 CDS
T04267
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
por03400
]
APT59_04885
DNA repair and recombination proteins [BR:
por03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
APT59_04885
Archaeal homologous recombinant proteins
APT59_04885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FliT
RTG2_C
Motif
Other DBs
NCBI-ProteinID:
ALZ86790
UniProt:
A0A0U4WA82
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Position
1069153..1070358
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AA seq
401 aa
AA seq
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MRLLHTSDWHLGQHFLGRTRETEHRAFLAWLVAQVEEQAVDVVLVAGDIFDTATPPSYAR
ELYNGFIVALRGTGASLVVLGGNHDSAAVLAESRELLACLDTRVIPCVSETPADQLLELR
RRDGEIGALLCGIPFVRPRDVVQSQAGQSADEKRQALQQAIQGHYAELHGLAEARRAELG
VALPIIATGHLTTVGASASESVREIYVGSLDAFPTSAFPPADYIALGHIHRPQRVGGLEQ
VRYSGSPLCLSFDEERAKEVLLVEFGTGLEQVTPLAVPCFQPLAVVQGTLDTLGAALAQA
AADGSPECPVWVEVVVAGDDYLADLQPRITALVAELPLEVLRVRRARSTVAPTLQSVQRE
TLDELSPLDVFSQRLAEETLDDELRTRLEGLYREVLGELPT
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
ctgcgcctgctgcacacctccgactggcacctggggcagcactttctcggccgcacccgc
gagaccgagcatcgcgcctttcttgcctggctggtggctcaggtggaggagcaggcggtg
gacgtggtgctggtggcaggggacatcttcgataccgccaccccaccgagctatgcccgc
gagttgtacaacggcttcatcgtcgccctgcgtggcaccggcgccagcctggtggtgctc
ggcggcaaccatgattcggccgcggtgctggccgagtcccgcgaattgctggcctgcctg
gacacccgggtgatcccctgtgtcagcgagacgccggcggatcaactgctggaattgcgt
cgccgtgatggcgaaatcggcgcgctgctctgtggcattcccttcgtccggccgcgtgac
gtggtgcagagccaggcagggcaaagcgctgatgaaaagcgccaggcgctgcaacaggcc
atccaggggcactatgccgaactccatggcctggccgaggcacgtcgcgccgagctgggc
gtcgccctgccgatcatcgccaccggtcacctgaccaccgtgggtgccagcgccagcgag
tcggtgcgggagatctacgtcggcagcctcgatgcctttcccaccagcgcctttccgccg
gcggactacatcgctctcggccacatccaccggccccagcgggtcggggggctggagcag
gtgcgctacagtggttcgcccctgtgcctgagcttcgacgaagagcgcgccaaggaggtc
ctactggtggagttcggcacgggtctggagcaggtcacgccactggcggtaccctgtttc
cagcccctggcggtggtgcagggcactctggataccctgggcgcggccctggctcaggcg
gccgctgacggcagtcccgagtgtccggtgtgggtcgaggtggtggtggccggtgacgac
tacctggccgatctgcaaccacgcatcacggccctggtagccgagttgccgctggaggtg
ctacgcgtccgccgggcacgtagtacggtggcgccgaccctgcagagcgtccagcgcgag
acgctggatgaactcagcccgttggacgtcttcagccagcgcctggccgaggagaccctc
gacgacgagctgcgcacccggctggaaggcctttaccgcgaggttcttggcgagttgccg
acctga
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