Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_05255
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Entry
APT59_05255 CDS
T04267
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por00550
Peptidoglycan biosynthesis
por01100
Metabolic pathways
por01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
por00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
APT59_05255
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
APT59_05255
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
por01011
]
APT59_05255
Enzymes [BR:
por01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
APT59_05255
Peptidoglycan biosynthesis and degradation proteins [BR:
por01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
APT59_05255
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ALZ83640
UniProt:
A0A0U4VX57
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All DBs
Position
1163276..1165183
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AA seq
635 aa
AA seq
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MSQPIRLKDHEKDAQLVRARVMVGAALFLVLACVLVARMYYLQVIQYQYHSTLSENNRVH
VQPIPPTRGLIYDRNGIIVADNRPSFSLTITRERADNWRETLDTLVQVLGLTEEDRELFE
KRMKQGRRPFEPVPVLFELTEEQIAKIAVNQFRLPGVEVTAQLVRHYPMGEHFAHSVGYV
GRINEQELKRLDPVNYSGTHHIGKTGVERFYEPELHGEVGYEEVETNARGRVLRVLNRTD
PKPGKDIVLTIDSRLQAAAEAALGGRRGAIVAIQPKTGEVLAMVSQPSYDPNPFVTGISF
KEYSELRDSIDRPLYNRVLRGLYPPGSTIKPAVAIAGLDSGATTPQARIFDPGYYELPNY
DHKYRNWNHGGEGYVDLDMALMRSNDTYFYDLAHKIGIDRLAEYMGKFGLGQKVALDMFE
ESPGLMPSRQWKRATRRQAWFPGETLILGIGQGYMQTTPLQLAQVTTLIANHGKWIRPHL
ARTLDGQPPVDTNPMPDIQLKDDSYWDRAVHGMEMVVQNPRGTAHKINVGAQYRIAGKSG
TAQVVAIRQNERYNSAALKERHRDHALFVAFAPADNPQIAVAVMVENGESGSGVAAPVVR
QVLDAWLLDDQGHLKAEYAKPSTAAATAAATKVQP
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaacccatacgcctcaaggaccacgagaaagacgcccagctcgtccgcgcccgc
gtgatggtcggggcggcactctttctcgtgctcgcctgcgtactggtggcgcgcatgtac
tacctgcaggtcatccagtaccagtaccactcgaccctctcggaaaacaaccgggtccac
gttcagccgattccgcctacccgcgggctgatctacgaccgcaacggcatcatcgtcgcc
gacaaccgccccagcttcagcctgaccatcacccgtgagcgggctgacaactggcgggag
accctcgataccctggttcaggtcctgggcctgaccgaggaagatcgcgagctgttcgag
aagcgcatgaaacagggccggcggcccttcgaaccggtgccggtgctattcgagctgacc
gaggagcagatcgccaagatcgccgtcaaccagttccgtctacccggggtcgaggtgacg
gcgcagctggtgcgccactatcccatgggcgagcacttcgctcattccgtgggctacgtc
ggccggatcaacgagcaggagctcaagcgcctggatccggtcaactacagcggcacccat
catatcggcaagaccggcgtggagcgcttctacgaacccgagctgcatggcgaggtgggt
tacgaggaagtggaaaccaacgcccgcggccgggtgttgcgggtgctcaatcgcaccgac
cccaagccgggcaaggacatcgtcctgaccatcgattcccgcctgcaggccgccgccgaa
gccgccctgggcgggcgccgcggtgccatcgtcgccatccagcccaagaccggcgaggtg
ctggccatggtcagccagccgagctacgaccccaaccccttcgttaccgggatcagcttc
aaggaatattccgagctgcgcgattccatcgatcgcccgctctacaaccgcgtgctgcgc
gggctctacccgccgggctcgaccatcaagccggcggtggccatcgccggtctcgacagc
ggcgccaccacgccccaggcgcggattttcgatccgggctactacgagctgcccaactac
gatcacaagtaccgcaactggaaccacggcggcgaaggctacgtggatctggacatggcc
ctgatgagatccaacgacacctatttctacgatctggcccacaagatcggcatcgaccgg
ctcgccgagtacatgggcaagttcgggctcgggcagaaggtcgccctggacatgttcgag
gagtccccggggctgatgccttcgcgccagtggaagcgcgctacccgtcggcaggcctgg
ttcccgggtgagacgctgatcctcggtatcggccagggctacatgcagaccacgccgctg
cagctggcccaggtcaccaccctgatcgccaaccacggcaagtggatccgtccgcacctg
gccagaaccctggacggccagccgccggtggacaccaatcccatgcccgatatccagctc
aaggacgatagctactgggatcgcgcagtccacggcatggagatggtggtgcagaatccc
cgcggcaccgcgcacaagatcaatgtcggtgcccaataccgcatcgccggcaagagtggt
accgcccaggtggtcgccattcgccagaacgagaggtacaactcggcggcgctcaaggag
cggcaccgtgaccacgccctgttcgtggccttcgccccggcggacaatccgcagatcgcc
gtggcggtgatggtcgagaacggcgagtcgggcagtggcgtggccgccccggtggtgcgc
caggtcctcgacgcctggctgctcgatgaccagggccatctcaaggcggaatacgccaag
cccagtaccgctgcggccactgccgccgcgaccaaggtgcagccatga
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