Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_05945
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Entry
APT59_05945 CDS
T04267
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
por03019
]
APT59_05945
03009 Ribosome biogenesis [BR:
por03009
]
APT59_05945
Messenger RNA biogenesis [BR:
por03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
APT59_05945
Ribosome biogenesis [BR:
por03009
]
Prokaryotic type
rRNA processing factors
APT59_05945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
ALZ83770
UniProt:
A0A0U4HCZ9
LinkDB
All DBs
Position
1327631..1329085
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AA seq
484 aa
AA seq
DB search
MSEEILINITPMESRVAVVENGVLQEVHVERTLRRGIVGNIYRGRVVRVLPGMQAAFIDI
GLARAAFIHAAEISQREGAAVESISALVREGQTLVVQVTKDPIGTKGARLTTHLSIPSRY
LVYMPRTSHVGISLKIEDEAERERLKAIMARCVESEGIEHEGGFILRTAAEAAREEDILA
DIRYLRRLWQQISSNLQGPTPAPIYEDLTLALRALRDLVGPRTEKIRVDSRENFQRIGQF
VEELMPEVAARLEHYPGERPIFDLYGVEDEIQKALERKVLLKSGGYLVIDPTEAMTTIDV
NTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHQRQVIRTLE
KQLERDHAKTNIIGITELGLLQMTRKRTRESLSQVLCEPCGNCQGRGILRTAETICYEIF
REILREARAYQANSYLVLANQKVVDRLLDEESGNVADLEAFIGRTVKFQVETMYSQEQYD
VVLL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagagatcctcatcaacatcactcccatggagtcccgtgtcgccgtcgtggaa
aacggtgtgctgcaggaggtgcacgtcgagcgcacgttgcgtcgcggtatcgtcggcaac
atctatcgcggccgggtcgtgcgggtgctgccgggcatgcaggcggccttcatcgacatc
ggcctggcccgcgcggccttcatccacgccgccgagatctcccagcgtgaaggggcggcg
gtggagagcatcagcgcgctggtgcgcgagggccagacgctggtggtccaggtcaccaag
gaccccatcggcaccaagggcgcgcgccttaccacccatctgtcgattccctcgcgctat
ctggtctatatgccgcgtacctcccatgtcggcatctcgctgaagatcgaggacgaagcc
gaacgcgagcgcctcaaggcgatcatggcgcgctgcgtggaaagcgagggcatcgagcac
gagggcggtttcatcctgcgcaccgccgccgaggcggcgcgcgaggaagacatcctggcc
gacatccgctatctgcgccgcctctggcagcagatctccagcaatctgcagggaccgacg
ccggcgcccatctatgaagacctgaccctggccctgcgtgccctgcgcgatctggtcggg
ccgcgtacggaaaagatccgcgtcgacagccgcgagaacttccagcgcatcggtcagttc
gtcgaggagttgatgcccgaggtcgcggcgcggctggagcattatccgggcgagcggccg
atcttcgatctgtatggcgtggaagacgagatccagaaggccctggagcgcaaggtactg
ctcaagtccggcggctatctggtgatagatcccaccgaggcgatgaccaccatcgacgtc
aataccggcgccttcgtcggccatcgcaatctggaagagaccatcttcaagaccaacctg
gaggccgctaccgccattgcccgtcagctgcggctgcgcaatctcggcggcatcatcatc
atcgatttcatcgacatggaagacgaggagcatcagcgccaggtgatccgtaccctggaa
aagcagctcgaacgcgaccatgccaagaccaatatcatcggcatcaccgagctgggcctc
ctgcagatgacccgcaagcgcacccgcgagagcctgtcccaggtgctctgcgaaccctgc
ggcaattgtcagggacgcggcatcctgcgcaccgccgagaccatttgctacgagatcttt
cgtgaaatcctgcgcgaggcgcgggcctaccaggccaattcctatctggtgctggccaat
cagaaggtggtggatcggctgctggatgaggagtcgggcaatgtcgccgatctcgaagcc
ttcatcggccgcaccgtcaagttccaggtggagaccatgtattctcaggagcagtacgat
gtcgtgctgctctag
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integrated database retrieval system
