Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_06255
Help
Entry
APT59_06255 CDS
T04267
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
por03016
]
APT59_06255
Enzymes [BR:
por01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
APT59_06255
Transfer RNA biogenesis [BR:
por03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
APT59_06255
Prokaryotic type
APT59_06255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ALZ83828
UniProt:
A0A0U4WXM9
LinkDB
All DBs
Position
1394706..1395764
Genome browser
AA seq
352 aa
AA seq
DB search
MTEDQLLGPRAHGEPCGQAILKASAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAV
RRLARAAGVPQRAISYAGLKDRQALTRQWFSLHLPGKADPDLAAACDETLVILQQGRHRR
KLQRGAHAANGFRLRLTGLKADPAALEARLQAIAAEGVPNYFGPQRFGYEGGNLVDAQQC
AREQRLPEQRNRRSRTLSAARSWLFNQVLAGRVAESSWNRAQEGDLLAFTDSRSHFPATA
ADLTDPRLAALDLHPTGPLWGAGESPVQGSAAALEQEVAKAAGELPAWLAGAGLSHERRI
LRLPIGGLTWHYPAPDILQLEFVLPAGCFATAVVRELVTLGEAGQTEHPCDF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaccagctactcgggccgcgcgcccatggcgagccctgtggccaggcgatt
ctcaaggccagcgccgaggacttccaggtggacgaggtactggacatcccgctgagcggt
gatggcgagcacctctggctgtgggtcgagaagcgtggcctcaataccgaagaggcggtg
cgccgcctggcgcgggcggccggcgtgccgcagcgggcgatcagctacgccggcctcaag
gatcgccaggcgctgacccgccagtggttcagcctgcacctgcccggcaaggccgatccg
gatcttgcggccgcctgcgacgagacgctggtgatcctccagcagggtaggcaccggcgc
aagctgcaacgcggcgcccatgccgccaatggcttccgcctgcgcctgaccggactcaag
gccgatcccgcggcgctggaggctcggctgcaggccatcgccgccgagggcgtgcccaac
tatttcggtccgcaacgttttggctatgagggcggcaatctggtggacgcccagcaatgc
gcccgtgaacagcgcctgcccgagcagcgcaaccggcgttcgcggaccttgtccgccgcg
cgcagctggctgttcaatcaggtgctggccgggcgcgtcgccgaaagctcctggaatcgg
gcgcaggagggggatctgctggcctttaccgacagccgcagccacttcccggcgaccgcc
gccgatctgacggatccgcgcctggcagcgctcgatctgcaccctaccggcccgctctgg
ggcgccggcgaatcgcccgtgcagggctctgccgccgccctggaacaggaggtggcgaag
gccgccggagagctgcccgcctggctggccggtgccggcctctcgcatgaacggcgcatc
ctgcgcctccccatcggcggcctgacgtggcattatcccgctcctgacattctgcaactc
gaattcgtcctgccggccggctgttttgccaccgcagtggttcgcgagctggtaacgctt
ggcgaggcagggcagacggaacatccatgcgacttctga
DBGET
integrated database retrieval system
