Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_06285
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Entry
APT59_06285 CDS
T04267
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
por00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
APT59_06285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
por03400
]
APT59_06285
DNA repair and recombination proteins [BR:
por03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
APT59_06285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
ALZ83833
UniProt:
A0A0U4XRI5
LinkDB
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Position
complement(1400093..1402669)
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AA seq
858 aa
AA seq
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MSDLSAHTPMMQQYLKIKHQHPEQLLFYRMGDFYELFYDDARRAAKLLDITLTARGASAG
KSIPMAGIPFHSAEGYLAKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSDEA
LLDERRDNLLTAVLGDERLFGLAVLDIASGRFTVQELAGWETLLAELDRLNPAELLIPDD
WPAGLPAEKRRGVRRRAPWDFDCDSALKSLCQQFGTGDLKGFGCDKLGLAIGAAGCLLAY
AKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDVNLAGGRDNTLQSVVDRCQTAMG
SRLLTRWLNRPLRNRAVIEARQDAITCLLEGYRFETLQPQLKDIGDLERILPRIGLRNAR
PRDLARLRDALAALPTLQEGLTQMIAPHLLDLARSIQTYPELAATLARAIIDNPPAVIRD
GGVIKRGYDSELDELQTLSENAGQFLMDLEAREKARTGLQGLKVGYNRVHGYFIEIPSRQ
AESAPADYIRRQTLKGAERFITPELKAFEDKALSAQSRALAREKALYETLLDELIGHLAP
LQDSAAALAELDVLANFAERALNLDLNKPRFVEEPCLKIGQGRHPVVEQVLETPFVANDV
TLDNDTRMLVITGPNMGGKSTYMRQTALIVLLAHVGSFVPAASCELSLVDRIFTRIGSSD
DLAGGRSTFMVEMSETANILHNASEHSLVLMDEVGRGTSTFDGLSLAWAAAEQLARLRAW
TLFATHYFELTVLPEGQPSVANVHLNATEHNDRIVFLHHVLPGPASQSYGLAVAQLAGVP
EDVILRAREHLARLEAASFNGEVGTPLPVSAPAKGRPLQADLFASAIHPLIEELERLQPD
DITPRRALELIYEWKKRI
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctctccgcgcacacgcccatgatgcagcagtacctcaagatcaagcatcaa
catcccgagcagctgctgttctatcgcatgggcgatttctacgagctgttctacgacgac
gcccggcgtgccgccaagttgctcgacatcaccctgaccgctcgcggcgcctcggccggc
aaatccattcccatggccggcattcccttccactccgccgaaggctacctggccaagctg
gtcaagctcggcgaatcggtggtgatctgcgagcagatcggcgatccggccaccagcaag
gggccggtggagcgtcaggtggtacgcatcatcaccccgggcaccgtcagcgacgaggcc
ctgctcgacgagcgccgcgacaacctgctgaccgccgtgctgggcgatgagcgtctgttc
ggcctggccgtgctcgacatcgccagtggccgcttcactgtgcaggaactggccggctgg
gagactctgctggcggagctggatcgcctcaaccccgcggaactgctgattcccgacgac
tggcctgccggcctgcccgccgagaagcggcgtggcgtacgccgccgggcgccctgggac
ttcgattgcgactcggcgctcaagagcctctgccagcaattcggtaccggcgacctcaag
ggcttcggctgcgacaagctgggcctggccatcggcgccgctggctgcctgctggcctat
gccaaggaaacccagcgtaccgccctgccccacctgcgcagcctcaggcacgagcgcctg
gacgacaccgtcatcctcgacggcgccagtcgccgcaacctggagctggacgtcaacctg
gccggtggccgcgacaacaccctgcaatcggtggtggatcgttgccagaccgccatgggc
agtcgcctgctgacccgctggttgaatcgtcccctgcgcaatcgcgcggtgatcgaagcc
cgccaggacgccatcacctgcctgctggaaggctatcgcttcgaaacgctgcagccgcag
ctcaaggacatcggcgacctggagcgcatcctcccccgcatcggcctgcgcaacgcccgc
ccgcgcgacctcgcccgcctgcgcgatgccctggccgcgctgccgacgctgcaggaaggg
ctgacgcagatgatcgcgccgcacctgctcgacctcgcgcgcagcatccagacctatccg
gaactggccgccaccctggcccgcgccatcatcgacaacccgcctgcggtgatccgcgac
ggcggcgtcatcaagcgtggctacgacagtgagctggacgagctgcagaccctgagcgag
aacgccggccagttcctcatggacctggaggcccgcgaaaaggcccgcaccggcctgcaa
ggtctcaaggtcggctacaaccgcgtccacggctacttcatcgagattcccagccggcag
gccgaatcggcgccagccgactacatccgtcgccagaccctcaagggcgccgagcgcttc
atcactcccgagctcaaggccttcgaagacaaggccctgtcggcccagagtcgcgcccta
gcacgggaaaaggccctttacgagacgctgctggacgagctcatcggccacctggcgccc
ctgcaggacagcgccgcggccctggccgagctggacgtcctggccaacttcgccgagcgc
gccctcaacctggacctgaacaagccgcgcttcgtcgaggagccctgcctgaagatcggc
cagggtcgccacccggtggtggaacaggtgctggaaacgcccttcgtcgccaacgacgtc
accctcgacaacgacacccgcatgctggtgatcaccggcccgaacatgggcggtaagtcc
acctacatgcgtcagacggcgctgatcgtgctgctggcccatgtcggcagcttcgtcccg
gcggccagctgcgagctgtccctggtcgaccgcatcttcacccgtatcggctccagcgac
gacttggccggcggtcgctccaccttcatggtggagatgagcgagaccgccaacatcctg
cacaacgccagcgaacacagcctggtgctgatggacgaggtaggacgcggcaccagcacc
ttcgatggcctgtccctcgcctgggctgccgccgagcagctggcacggctgcgtgcctgg
acgctgttcgccacccactatttcgagctgaccgtgctgccggaaggccagccgagcgta
gccaacgtgcatctcaacgccaccgagcacaacgaccgcatcgtcttcctgcaccatgtg
ctgcccggtccggccagccagagctacggcctggccgtggcgcaactggcgggcgttccg
gaggacgtcatcctgcgggcgcgcgaacacctcgctcgcctggaagcggccagtttcaat
ggagaggtgggtacgccgctgccggtgagcgcgccggccaagggccgcccgctgcaggcc
gatctgttcgccagcgccatccatcctctcatcgaggaactggaacgcctgcagccggac
gacatcacacccagacgggccctggagcttatctacgaatggaaaaagcgtatctga
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