Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_06610
Help
Entry
APT59_06610 CDS
T04267
Name
(GenBank) LacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
por03000
]
APT59_06610
Transcription factors [BR:
por03000
]
Prokaryotic type
Helix-turn-helix
LacI family
APT59_06610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
Motif
Other DBs
NCBI-ProteinID:
ALZ83896
UniProt:
A0A0U4VXY5
LinkDB
All DBs
Position
1478174..1479190
Genome browser
AA seq
338 aa
AA seq
DB search
MNRTGSRSSGRPTLTEVALQAGVSPITASRVLRGVATVAPELVTRVQEAAARLGYVTNPA
ARALASAQGHSVVVLVPSLSNHLFIEPLEAIHEVLHPRGLEVLIGNYHYDPAEEEKLIRN
YLAYQPRGLLLTGFDRTDAARQLLAASGVPRVHMMELDPAGATPSVGFSQHAAGAAAARH
LLAAGRTRLGYVAAQLDPRALARGEGFREVLREAGCYDPGLDVLDPQPSSVGLGARQFRD
LLAQRPDVDGLFFCNDDLAQGALFEAQRLGIAIPERISVLGFNDLPGSAHTVPRLSSIQT
PRAAVGRQAATLLLGLLDGRSQPTCVDLGFELVSRESV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaacgggttctcgtagttccggtcggcccaccctcaccgaggtggcgctgcag
gccggcgtttctcccatcaccgcttcccgtgtcttgcgcggggtcgccaccgtggcgccc
gagctggtcacccgcgtgcaggaggcggccgcgcgcctcggttatgtcaccaatccggcc
gcccgtgccctggcctcggcccaggggcattcggtggtggtgctggtaccgtcgctgtcg
aaccacctgttcatcgaaccgctggaggccattcacgaggtcctgcatccgcgcggcctg
gaggtgctgatcggcaactatcactacgatcccgcggaagaggaaaagctgatccgcaac
tacctggcctatcagcccaggggcctgctgctgaccggcttcgaccgcaccgacgccgcc
cgccagttgctggcggccagtggggtgcctcgggtacacatgatggagctggatccagcc
ggcgcgacacccagtgtcggcttctcccagcacgcggccggtgcggcggccgcgcggcat
ctactggcggcggggcgtacgcgcctgggctacgtggccgcgcagctcgatccccgggcc
ctggcgcggggcgaaggttttcgcgaggtgctgcgcgaagcggggtgctacgacccgggc
ctggacgtattggatccgcagccgtcgtccgtgggattgggcgcccggcaattccgtgac
ctgctggcgcagcgaccggatgtcgacggcctgttcttctgcaatgacgacctggcccag
ggcgccctgttcgaggcgcagcgtctgggcatcgccattcccgagcggatctcggtgctg
ggcttcaacgacctgcccggctcggcgcacacggtgccccggctgtcctccatccagacc
ccgcgcgccgcggtagggcgccaagccgcgaccctgttgctgggactgctcgatggtcgc
agtcaaccgacctgcgtggacctgggattcgagctggtgagccgggagagtgtgtag
DBGET
integrated database retrieval system
