Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_06970
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Entry
APT59_06970 CDS
T04267
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por00020
Citrate cycle (TCA cycle)
por00190
Oxidative phosphorylation
por00650
Butanoate metabolism
por00720
Other carbon fixation pathways
por01100
Metabolic pathways
por01110
Biosynthesis of secondary metabolites
por01120
Microbial metabolism in diverse environments
por01200
Carbon metabolism
Module
por_M00009
Citrate cycle (TCA cycle, Krebs cycle)
por_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
por_M00149
Succinate dehydrogenase, prokaryotes
por_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
por00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
APT59_06970 (sdhA)
00650 Butanoate metabolism
APT59_06970 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
APT59_06970 (sdhA)
00720 Other carbon fixation pathways
APT59_06970 (sdhA)
Enzymes [BR:
por01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
APT59_06970 (sdhA)
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
FAD_binding_3
FAD_oxidored
Thi4
Pyr_redox_3
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ALZ83965
UniProt:
A0A0U4WPI4
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All DBs
Position
1556342..1558114
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AA seq
590 aa
AA seq
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MSTIRHISFDAIIVGGGGAGMRAALQLAQSGHKTAVITKVFPTRSHTVSAQGGITCAIAS
SDPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEQGRIYQRP
FGGQSKDYGKGGQAARTCAAADRTGHALLHTLYQGNLKNNTVFLNEWYAVDLVKNQDGVV
VGVIAIAIETGETVYVKAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEV
LAGNGCGPDGDHVLLKLDHLGEDVLHSRLPGICELSKTFAHVDPVVAPVPVIPTCHYMMG
GIATNIHGQAITQDANGNDRIIEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALKEGIEHRGASESDLEASLQRLSGVNERTTGDDVATLRKQLQTCMQNYFGVFRTGE
YMQKGIAELADLRERIAKVKINDKSQGFNTARIEALELQNLLEVAEATAIAAENRKESRG
AHAREDFEERDDENWLCHTLYFPGEKRVSKRDVNFAPKTVPMFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaattcgtcatatttcgtttgatgccatcatcgtaggtggcggcggcgctggt
atgcgcgctgccctgcaattggcccagtccggccacaagaccgcagtcatcaccaaggtt
ttcccgacccggtcccacaccgtatccgcccagggtggcatcacctgcgccatcgcctcg
tccgatccgaacgatgactggcgctggcacatgtacgacaccgtcaaggggtcagactat
atcggtgaccaggacgctatcgagtacatgtgctccgtaggcccggaagcggtcttcgag
ctggaacacatgggtctgccgttctcccgtaccgagcagggccgcatctatcagcgtccc
tttggtggccagtccaaggactacggcaagggcggccaggcggctcgtacctgcgccgcg
gccgaccgtaccggtcatgccctgctgcacaccctctatcagggcaacctgaagaacaac
acggtattcctgaacgagtggtacgccgtggacttggtgaagaaccaggacggcgtcgtg
gtcggtgtcattgccatcgccatcgaaaccggcgagaccgtctacgtcaaagccaaggcc
accgtgctggccaccggaggtgcgggtcgtatctacgcctccactaccaacgccctgatc
aacactggcgacggtgtcggcatggcgctgcgtgccggcgtgccggtgcaggatatcgaa
atgtggcagttccacccgaccggcatcgccggcgccggggtactggtcaccgaaggttgc
cgcggtgagggtggttacctgatcaacaagcacggcgagcgcttcatggagcgctatgca
cccaacgccaaggatctggccggtcgcgacgtggtcgcccgctccatggtgaaggaagtg
ctggccggcaacggttgtggtccggatggcgaccatgtgctgctgaagctggaccacctg
ggtgaagacgtcctgcacagtcgtctgcccggcatctgcgaactgtccaagaccttcgcc
catgttgacccggtcgtcgcaccggtacccgttatccctacatgccactatatgatgggt
ggcatcgccaccaacatccatggtcaggccatcactcaagacgccaacggcaacgacagg
atcatcgaaggtctgttcgcagtaggcgaagtggcctgcgtatccgtgcacggtgcgaac
cggctgggcggcaactcgctgctggacctggtggtcttcggtcgtgcagctggtctgcac
ctggagaaggcactcaaggaaggtatcgagcaccgcggtgcctcggaaagcgatctggaa
gcctcgttgcagcgcctgtccggcgtcaacgagcgcaccactggtgacgacgtcgctacc
ctgcgcaagcaactgcagacctgcatgcagaactacttcggggtgttccgcaccggcgag
tacatgcagaagggcatcgccgagctggccgacctgcgcgagcgcatcgccaaggtcaag
atcaacgacaagagccagggcttcaacaccgcccgcatcgaagcgctcgagctgcagaac
ctgctcgaagtggccgaagcaaccgccatcgccgccgaaaatcgcaaggaatcccgtggt
gctcacgcccgtgaagacttcgaggagcgcgacgacgagaactggctgtgccacaccctc
tatttccccggtgaaaagcgggtcagtaagcgtgacgtcaacttcgcgccgaagaccgta
ccgatgttcgaacccaaggttcggacttactaa
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