Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_06975
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Entry
APT59_06975 CDS
T04267
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por00020
Citrate cycle (TCA cycle)
por00190
Oxidative phosphorylation
por00650
Butanoate metabolism
por00720
Other carbon fixation pathways
por01100
Metabolic pathways
por01110
Biosynthesis of secondary metabolites
por01120
Microbial metabolism in diverse environments
por01200
Carbon metabolism
Module
por_M00009
Citrate cycle (TCA cycle, Krebs cycle)
por_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
por_M00149
Succinate dehydrogenase, prokaryotes
por_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
por00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
APT59_06975 (sdhB)
00650 Butanoate metabolism
APT59_06975 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
APT59_06975 (sdhB)
00720 Other carbon fixation pathways
APT59_06975 (sdhB)
Enzymes [BR:
por01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
APT59_06975 (sdhB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_9
Motif
Other DBs
NCBI-ProteinID:
ALZ83966
UniProt:
A0A0U4P0K9
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All DBs
Position
1558126..1558830
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AA seq
234 aa
AA seq
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MLKVSVYRYNPDQDGLPSMQEFQVDTGGKDLMVLDVLALIKEQDEGFSYRRSCREGVCGS
DGMNINGKNGLACITPLSAVVKNDKLVVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQN
ETPAPAIERLQSPEDREKIDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLAD
SRDTKTEERLAAMDDPFSVFRCRSIMNCVAVCPKGLNPTKAIGHVRAMLLQSGT
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagtcagcgtatatcgttacaacccggatcaggacggcctgccgtccatgcag
gagttccaggtcgataccggtgggaaggatctcatggtgctggacgtcctggctctgatc
aaagaacaggatgaaggcttctcctaccgtcgttcctgccgcgaaggcgtgtgcggctcc
gacggcatgaacatcaacggcaagaacggcctggcgtgcatcacgccgctgtcggccgtg
gtcaagaacgacaagctggtcgtgcgtccgctgcccggcctgccggtcattcgtgacctg
gtcgtcgacatgagcatcttctacaagcaatacgagaaggtgaagccgttcctgcagaac
gagaccccggcaccggccatcgaacgcctgcagagcccggaagaccgtgagaagatcgac
ggtctgtacgagtgcatcctgtgcgcctgctgctcgacgtcctgcccgtccttctggtgg
aaccccgacaagttcctcggccccgctgcactgctgcaggcctatcgcttcctggccgac
agtcgtgacaccaagaccgaagagcgcctggcggccatggacgatccgttcagcgtgttc
cgctgccgctcgatcatgaactgtgtggcggtctgtcccaaggggctgaacccgaccaag
gccatcggccatgtgcgggcgatgctgctgcagagcggtacctga
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