Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_07300
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Entry
APT59_07300 CDS
T04267
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
por00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APT59_07300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
por02000
]
APT59_07300
Transporters [BR:
por02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
APT59_07300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
PBP_like_2
PTH2
Motif
Other DBs
NCBI-ProteinID:
ALZ86810
UniProt:
A0A0U4HM61
LinkDB
All DBs
Position
1622200..1623249
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AA seq
349 aa
AA seq
DB search
MSSISCRQGLSALLLAAAAAGMAFPAHAETTLYVAGVGGSTEQMYKTRVIPAFEKAHGVK
VVYVSGNSTETLAKLQAQKGRQQINVAMMDDGPMYQALQLGFCEKLTDAPVYQDLYPLAR
LSPEATAVGMVATGIGYNEEAFKKRGWAAPTSWTDLEDPKYRQLLGMPPITNTYGLHSLI
EMARLNGGGEKDIDPGFAVFEKKIAPNVLAWVSAPGEMDGMMQNGDVVMAVYGSGRAVAL
QNTGFPLKFIYPKEGAVALQVAACSVTPNAQSELSQQFIQYVLSPEIQKIQSESNGFAPV
NRTVKLPPELASRMPYGQEKVDSLLKVDWDTINQKRSEWTTRWNRTIER
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atctcatccatctcctgtcgtcaggggctgtccgcgctgctgttggccgcagcggccgct
ggcatggcgtttccggcccacgccgaaacgacgctgtacgtcgccggcgtcggcggttca
accgagcagatgtacaagacccgcgtcattcccgccttcgagaaggcgcatggggtcaag
gtcgtgtatgtgtcgggcaactcgactgaaacgctggccaagttgcaggcccagaagggg
cggcagcagatcaacgtcgccatgatggacgatggccccatgtaccaggcgctgcagctg
gggttttgcgaaaagctcacggatgcgcctgtctaccaggacctgtatcccttggcgcgg
ctgagccctgaggctacggcagtaggtatggtcgccaccgggatcggctacaacgaagag
gccttcaagaagcgcggatgggcagccccgacgtcctggaccgatctggaagatcccaag
tatcggcagctgctgggcatgccgccaatcaccaatacctacggcctgcattcgttgatc
gaaatggcgcggctgaatggcggcggcgagaaagacatcgatccgggtttcgcggtgttc
gagaagaagatcgcgccgaacgtgctggcctgggtcagtgccccgggcgagatggacggg
atgatgcagaacggtgatgtggtcatggcggtgtacggcagtggccgtgcagtggcgctg
cagaacaccggctttccgctcaaattcatctacccgaaggagggcgctgtagccctccag
gtcgccgcctgctccgtcacgcccaatgcgcagtccgaactctcccagcagttcattcag
tacgtgctgtcgccggaaatccagaagatccagtccgaaagcaacggcttcgcgccggtc
aatcgcaccgtgaagctgccgccagaactggcttcccgtatgccttacggacaggaaaag
gtcgacagcctgctcaaggtcgattgggacaccatcaaccagaagcgttccgaatggacg
acgcgctggaacaggaccatcgagcgatag
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