Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_08560
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Entry
APT59_08560 CDS
T04267
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
por03016
]
APT59_08560
Enzymes [BR:
por01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
APT59_08560
Transfer RNA biogenesis [BR:
por03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
APT59_08560
Prokaryotic type
APT59_08560
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ALZ84255
UniProt:
A0A0U4P627
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All DBs
Position
1876933..1877925
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AA seq
330 aa
AA seq
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MDLLFLGTSAGVPTRRRNVSALALIEDQGKGWFLVDCGEATQHQLLRTPLSAADLRAICI
THVHGDHCYGLPGLLASAAMTGRSQPLVLIAPQAVHDWLAATHALTALHLPFELQLHALE
GFAGVSLGAWDIDAVALSHRVPSHAFRFCEARRPQRLDPAALAAAQVPRGPLWGRLHAGE
DVLHEGRLLRSADYLQAAHGERRLVVAGDNDDPALLTEACQGAQVLVHEATYAQAQIDKT
GQSWGHSSAAGIARFAEARGLPALLLTHFSPRYQADSGRSPSIEELRREAAAHYGGDLHL
AEDFSCFRLDRQGRLKALEQSSTRVCAGHS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctctttctcggtacctcggccggggtgcctacgcgtcggcgcaatgtctcg
gcccttgccctgatcgaggaccagggcaagggctggttcctcgtcgactgcggcgaggcc
acccagcatcagctcctgcgcaccccgctgtcggccgcggatctgcgtgccatctgcatc
acccatgtccacggcgaccactgctatggcctgccgggactcctggccagcgccgccatg
accggacgcagccagccactggtgctgatcgcaccccaggcggtccatgactggctggcc
gctacccatgcgctgaccgccctgcacctgcctttcgagttgcagctccatgccctggaa
ggctttgccggcgtctccctgggtgcctgggatatcgacgccgtcgcgctctcccaccgc
gtgcccagtcacgcctttcgcttctgcgaggcccgtcggccgcagcgactcgatccggcg
gctctggcggccgcccaggtgccgcgcggtccgctgtgggggcggctacatgcgggagag
gacgtgctgcacgaggggcgactgctgcgcagcgccgactacctgcaggcagcccatggg
gaacgacgattggtggtggcgggggacaacgacgatcccgccttgctcacagaggcctgc
cagggcgctcaggtgctggtccatgaagccacttacgcccaggcgcagatcgacaagacc
ggccagagctggggtcacagcagtgctgccggaatcgcccggttcgccgaggcgcgaggg
ttgccggcgttgctgcttacccatttcagtccgcgctatcaggccgattcgggacgttcg
ccctcaatcgaggagctgcgccgggaggctgccgcgcattatggcggtgacttgcacctc
gccgaggatttctcttgctttcgtctggatcgtcaggggcggctgaaagccctggagcag
agcagtacgagagtgtgcgctggtcactcctag
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