Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_09355
Help
Entry
APT59_09355 CDS
T04267
Name
(GenBank) signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
por00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APT59_09355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
por02000
]
APT59_09355
Transporters [BR:
por02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
APT59_09355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTK
Motif
Other DBs
NCBI-ProteinID:
ALZ84398
UniProt:
A0A0U4P1V2
LinkDB
All DBs
Position
2042286..2043470
Genome browser
AA seq
394 aa
AA seq
DB search
MSTPLTLRVLGTSVTLLEPIRQRAEAELGIRLVYQIHDVQTAQRIAVLEPGSYDLYDQWF
HNVDFVWPARAIQPIDIRRIALWEEINDLPKRGRLHATDRLAPGCRPCDRLYVQHDGSLG
GQPSERISMLPLTHNADSFAYRPESLPTALVGQEESWAWLIDEGWCGHSALQSDAAIGAL
DAALAIQAAGLARFDDIGNLRLEEIDRLAELLVERQRHRHFAAFWSDDRSAGELTLAAGV
DIQSLWSPMLMALHRAGVDYRVAVPREGYRAWFGGLSLSRCAEGRVRDAAYAYLNWWLAG
WPGAVMARQGFYIANPVRARDHLSAAEWDFWYGGLPAREELYGSDGLPLIEVGQRREGGS
YAERMSHIGVWNSVMDEHNYLVRRWSEFLRTTAA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgccgctgaccctgagggtgctgggcacctcggtgaccctgctcgaacccatt
cgccagcgggcggaggcggagctgggcatccgcctggtctaccagatccacgatgtccag
accgcccagcgcatcgccgtgctggagccgggcagctacgatctctatgaccagtggttc
cacaacgtcgacttcgtctggccggcgcgggcgatccagcccatcgacatccgccgcatc
gcgctctgggaggaaatcaacgatctgcccaaacgcgggcggctgcacgccacggatcgc
ctggcgccgggctgccggccgtgcgaccgcctctatgtgcagcacgacggcagcctgggc
ggtcagcccagcgagcgcatcagcatgctgccgctgacccacaacgccgacagcttcgcc
taccgacccgaaagcctgcccaccgccctggtcggccaggaggagagctgggcctggctg
atcgacgagggttggtgcggccacagcgccctgcagagcgacgctgccatcggtgccctg
gacgctgccctggcgatccaggcagcaggtctcgcacgcttcgacgacatcggcaacctg
cgcctggaggagatcgatcgcctggccgagctgctggtggagcgccagcggcatcggcat
ttcgccgccttctggtccgacgaccgcagcgccggcgagctgaccctggccgccggggtg
gacatccagagtctctggtcgccgatgctcatggccctgcatcgcgccggggtcgactac
cgggtggcggtaccacgcgaaggctatcgggcttggttcggcggcctgtcgctgtcgcgt
tgcgccgagggacgggtgcgtgatgccgcctatgcctacctcaactggtggctcgccggc
tggcctggcgcggtcatggcccgtcagggcttctacatcgccaatccggtaagggccagg
gatcacctgagcgcagcggagtgggatttctggtacggcggtctgccagcgcgggaggag
ctgtacggtagcgacggcctgccgttgatcgaggtgggtcagcgtcgcgagggcggttcc
tacgccgagcgcatgagccatatcggcgtgtggaattcggtgatggacgagcacaactat
ctggtgcggcgctggagcgaattcttgcgcaccacggccgcctga
DBGET
integrated database retrieval system
