Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_09540
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Entry
APT59_09540 CDS
T04267
Name
(GenBank) mechanosensitive ion channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
por02000
]
APT59_09540
Transporters [BR:
por02000
]
Other transporters
Pores ion channels [TC:
1
]
APT59_09540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Asp4
Motif
Other DBs
NCBI-ProteinID:
ALZ84431
UniProt:
A0A0U4P6J2
LinkDB
All DBs
Position
complement(2084110..2086263)
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AA seq
717 aa
AA seq
DB search
MIFRLLQLFCLCFLLIGPVQAALPGLPGTEKDQVDPQFGQSLDQVIKTLESDQQRNRLLA
DLKKLQAAQTKAEPSASQGVIGLITDTMTVVEQQLQRDNLRERWQFQLDQAGAELAMLAP
APEQRLNLLLGFVITLAFWAGCALGLKSISHRLRIRFGLAEELPLRPRTLDLVRFALRKL
APWLLAFVITLLVSLWMPDSLGKTVAVTLAYAAVIGPLFAATVVVICSLPSGAHRSRALL
ILRRRAFRPLWIIGSLAALGGVASDPHLAETLGPHLAAVIAIGANICAALLTAQFALRFR
RPIAHLIRNQPLAKRQALRGLQGVRHLIARLWHLPLLILVAVSVVATFVSAGDTSDALRR
ALLFAVTMGAAMGLNALVRARLLHRRHHGRIQEAYAERLRAFFVLVLGIVIWLVGIELAL
RAWNLSLLGFSQGDGHAVASKFFGLGGTLLLAWLVWILADTAIHRSLNLHRVSPNNARAQ
TMLPLIRNVLFLTIFVIALIVALANMGVNVTPLLAGAGVIGLAVGFGAQSLVADLITGLF
IIIEDSLAIGDYVDVGNHLGTVEGLTIRTVRLRDIDGIVHTIPFSEIKSIQNYSRQFGYA
IFRLPIPQAMSVDKAIEMVQEVGRSLRQDPLMGRDIWSPLELQGVESFDSGMAILRFRFK
TAPIKQWEVSRAFNLKLKRYLDDAGIELASPRMNVRYEVGGSPLDQAARGSEAPSEG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatctttcgcctgctacagctgttttgcctctgcttcctgctcatcggtccggtccag
gcagccctgcccgggctgccaggtacagagaaggatcaggtcgacccccagttcggccag
tccctggaccaggtcatcaagaccctggaaagcgatcagcagcgcaatcgtctgctggcg
gatctcaagaagctgcaggccgcccagaccaaggcggaacccagcgcctcccagggagtg
atcggcctgatcaccgacaccatgacggtggtcgagcagcaattgcagcgcgacaacctg
cgcgagcgctggcaattccagctggatcaggctggcgcggagctggccatgttggcaccc
gcgcccgaacagcggctcaatctgctgttgggtttcgtcatcaccctggccttctgggcc
ggttgtgccctgggcctgaagagcatcagccatcggctgcgcatcaggttcgggctggcc
gaggagttgccgctcagaccgcggaccctggacctggtgcgtttcgccctgcgcaagctg
gcaccctggctgctggcgttcgtcatcaccctgctggtatccctgtggatgccggattcc
ctgggcaagaccgtggccgtgaccctggcctatgccgccgtcatcggcccgctgttcgcg
gcaacggtagtagtgatctgctccctgcccagcggcgcgcaccgcagccgggcgttgctg
atcctgcgccggcgcgcctttcgcccgctgtggatcatcggcagcctggcggccctgggt
ggcgtggccagcgatccgcacctggccgagaccctggggccgcacctggccgcggtcatc
gccattggcgccaatatctgcgccgccctgctcacggcgcaattcgcccttagattccgc
cgccccatcgcccacctgatccgcaaccagcccctggccaagcgtcaggcgctgcgcggt
ctccagggcgtgcgccacctgatcgcccggctctggcacctgccgctgctgatcctggtg
gccgtctcggtggtggctaccttcgtttcagccggcgacaccagcgacgccctgcgccgg
gcactgctgttcgccgtgaccatgggtgccgccatggggctcaatgccctggtccgggcg
cgcctgctgcaccggcgccatcacggccgaatccaggaagcctatgccgaacggctgcgg
gcgttcttcgtgctggtactggggatcgtcatctggctggtgggaatcgagctggccctg
cgggcctggaatctctccctgctggggttcagccagggtgacggccatgcggtcgccagc
aagttctttggcctgggtggcaccctgttgctggcctggctggtatggatcctggccgac
accgccatccatcgcagcctcaatctgcaccgcgtgagccccaacaatgctcgcgcccag
accatgttgccgctgatccgcaacgtgctgttcctgaccatcttcgtcatcgccctgatc
gtcgccctggccaacatgggcgtgaacgtcaccccgctgctggcgggtgccggcgtcatc
ggcctggcggtgggctttggtgcccagagcctggtagccgacctcatcaccgggctattc
atcatcatcgaggattccctggccatcggcgactacgtcgacgtgggcaaccacctgggt
accgtcgagggcctgaccatccgcaccgtgcggctgcgggacatcgacggcatcgtccac
accatccccttcagcgagatcaagagcatccagaactactcgcggcagttcggctacgcc
atcttccgcctgccgatcccgcaggcgatgtcggtggacaaggctatcgagatggtccag
gaggtcggccgctcgctgcgccaggacccgctgatgggccgggacatctggtcgccgctg
gagctgcagggggtggagagcttcgattcgggcatggccatcctgagatttcgcttcaag
accgcaccaatcaagcagtgggaggtctcgcgggccttcaacctcaagctcaagcgctac
ctggacgatgccggcatcgaactggcgtcgccgcgcatgaacgtgcgctacgaggtaggc
ggctcgccgctggatcaggcggcgcggggcagcgaagcgccgagcgaaggctga
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integrated database retrieval system
