Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_12000
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Entry
APT59_12000 CDS
T04267
Name
(GenBank) GntR family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
por03000
]
APT59_12000
Transcription factors [BR:
por03000
]
Prokaryotic type
Helix-turn-helix
LacI family
APT59_12000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_Crp_2
Peripla_BP_6
AbiEi_4
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ALZ84876
UniProt:
A0A0U4WKE5
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All DBs
Position
2588364..2589395
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AA seq
343 aa
AA seq
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MARKSRRELAQLDGTALPLTVREVALAAGVSPITVSRALHRPTLVSAATREHVLAVVKEL
GYVPNLLAGSLASSKSRLVAILLPTIANSIYATVVQAIMERLTEAGYQALIGPTGYSPEK
EEELLEAILGRRPDGIVLTGTLHTPASRERLAALNIPVVEAWDLSEEALDMQVGFSHEQV
GVALADHFVARGYRRFGVISVDDPRAMRRNLALQARLAALGVTEVPMEVLPLPATWEVGR
IGLARLLARPEPAELVLCSSDTLALGVVAEATSRGLSIPEQLAVIGFGDTTNGRFANPAL
STVSVNADAMGHRVAQSLLDRLAGDQRTVRLDTGFVLIERQSS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
ttggccaggaagtctcgacgcgaactcgcccagctcgatggcaccgcgctgcctctcacc
gtgcgcgaggtcgccctcgccgccggggtgtcgcccattaccgtatcccgggcgctgcac
cgcccgaccctggtgagcgctgccacccgcgagcatgtcctggccgtggtcaaggagctg
ggctacgtgcccaatctgctggcgggcagcctcgcctccagcaagagccggctggtggcc
atcctgttgcccaccatcgccaactccatctatgccacggtggtgcaggcgatcatggaa
cgcctcaccgaggccggctatcaggcgctgatcgggcccaccggctattccccggaaaag
gaagaggaattgctcgaagccatcctcggccgtcggcccgatggcatcgtgctcaccggc
accctgcacaccccggcgagtcgcgagcgcctggcggcgctgaacatccccgtggtggaa
gcctgggatctgagcgaagaagccctggacatgcaggtgggcttctcccatgagcaggtc
ggtgtcgccctggccgaccacttcgtcgcccgcggttatcgccgcttcggggtgatctcg
gtggacgatccccgtgccatgcgccgcaacctggcactgcaggcgcggcttgccgccctg
ggcgtcaccgaggtacccatggaagtcctgcccctgccggccacctgggaggtcggtcgc
atcggcctcgcgcggttgctggcaaggcccgagcccgcggaactggtgctgtgcagctca
gacaccctggcgctgggcgtggtcgctgaggctaccagccgcggcttgagcattcccgag
cagctggccgtgatcggcttcggcgacaccaccaatggtcgtttcgccaatccggcgctg
tccacggtcagcgtcaacgccgacgccatgggtcaccgcgtggctcaatcactgctcgat
cggctggccggcgatcagcggaccgtccgcctggataccggcttcgtgctgatcgaacgc
cagagctcctag
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