Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_12065
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Entry
APT59_12065 CDS
T04267
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
por03000
]
APT59_12065
Transcription factors [BR:
por03000
]
Prokaryotic type
Helix-turn-helix
LysR family
APT59_12065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ALZ84888
UniProt:
A0A0U4W0I8
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All DBs
Position
complement(2600980..2601888)
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AA seq
302 aa
AA seq
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MSDTDELTLRKLEIFLAFMRSRNLARAAAELGTSHVSVHRAIHSLENALRCPLFKHEGRT
LTPLDGAFVLEARAERLMQDLAETVRLTRQAAGFSADRFRLGALYSLTVKTVPQLIMGLK
LRRSELNIDLVLGSNADLAEQLHDFKLDAMLVALDDAVVDADCESVELFSDDIFLAAPID
SPFADQAEVDLRDLAGVPFVTLTQGFATFRDGRQVFAQAGFEPEVIMQVNDIFSLMSMVS
SGVGYALLPGRVEAVYQNRLKLLPLAPRYRLQQRIGAVFLRSRERDPNLLAFVAECRMYA
RN
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataccgacgaactcactctgcgcaagctggagatctttctggccttcatgcgc
agtcgcaacctggcacgcgccgccgctgaactgggcaccagccatgtcagcgtgcatcgg
gccatccactcgctggaaaacgccctgcgctgcccgctgttcaagcacgaggggcgcacc
ctgacgccgctggacggcgccttcgtgctggaggcccgtgccgaacggttgatgcaggac
ctggccgagacggtacggctcacgcgccaggcggcgggcttctcggctgatcgttttcgt
ctgggggcgctctattcgctgacggtcaagaccgtgccccagctgatcatggggctcaag
ctcaggcgcagcgaactcaacatcgatctggtgctgggctccaacgccgatctcgccgag
caactgcacgacttcaagctggacgccatgctggtggccctggacgacgccgtggtggat
gccgactgcgaaagcgtggagctgttcagtgacgacatctttctcgccgcgcccattgat
tcgcccttcgccgaccaagccgaggtcgacctgcgcgacctcgccggcgtgcccttcgtg
accctgacccagggcttcgccacctttcgcgacgggcgccaggtgttcgcccaggccggc
ttcgagccggaggtgatcatgcaggtcaacgacatcttctcgctgatgagcatggtcagc
tccggggtgggctacgccctgttgcccgggcgggtcgaggcggtctaccagaaccgcctc
aagctgttgcccctggcgccgcgctaccgtctgcagcagcgcattggcgcggtgttcctg
cgcagccgcgagcgcgatcccaatctgctggccttcgtcgctgaatgccggatgtatgcg
cgtaattaa
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