Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_12955
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Entry
APT59_12955 CDS
T04267
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por02010
ABC transporters
por02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
por00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
APT59_12955
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
APT59_12955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
por02000
]
APT59_12955
Transporters [BR:
por02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
APT59_12955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Asparaginase_C
Motif
Other DBs
NCBI-ProteinID:
ALZ85055
UniProt:
A0A0U4P8H3
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All DBs
Position
2807583..2808527
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AA seq
314 aa
AA seq
DB search
MKNFKKVVLGVALSAATSLALAGNGEIAVIVKSANSNYWQNVQKGVQETAKQHTSYKVTF
QGPASESAIADEVNMVVNAVNRGVSGIVLAPSDPDALVPAIKQAWEAHIPVVLIDSSVAE
SGAPYYQSFLSTDNNKAGELSAQRMIEKVGKTGKIAIMSYVPGTGSEVGRVGGFRKYLEQ
HSQLTVVGPFYSQSQMANALNQTTDVLASNPDLKGIYGANEPTAVGMARAIAQSGKAGKL
QAIGFDGNEDLQGFVRDGTLDAIVVQSSYRMGLESVATVIKVIEKQKVPKFIDTGVLLID
KANLDSADARNVLY
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttcaagaaagtggtcctgggtgtcgccctctccgccgcgacctccctggcg
ctggccggtaacggcgagatcgccgtcatcgtcaagagtgccaactccaattactggcag
aacgtgcagaagggcgtgcaggaaacggccaagcagcacaccagctacaaggtcaccttc
cagggaccggcctcggaatcggcgatcgccgacgaggtgaacatggtggtcaatgccgtc
aaccgcggcgtctcgggcatcgtgctggcgccgtccgacccggacgccctggtcccggcc
atcaagcaggcctgggaagcccatatcccggtggtgctgatcgactcctcggtggcggaa
agcggcgcgccctactaccagtcctttctctccaccgacaacaacaaggccggcgagctt
tccgcccagcgcatgatcgagaaggtcggcaagaccggcaagatcgccatcatgtcctat
gtgccgggcaccggctcggaagtgggccgggtcggcggcttccgcaaatacctggagcag
cattcgcagctgaccgtggtgggccccttctattcccagtcgcagatggccaacgccctc
aaccagaccaccgacgtcctggcctccaatcccgacctcaagggcatctacggcgccaac
gaacccaccgcggttggcatggcgcgggccatcgcccagtccggcaaggccggcaagctg
caggccatcggcttcgacggcaacgaggacctgcagggcttcgtgcgcgacggcaccctg
gacgccatcgtggtgcagagttcctatcgcatgggcctggaatcggtcgccacggtgatc
aaggtgatcgagaagcagaaggtgcccaagttcatcgacaccggcgtcctgctcatcgac
aaggccaacctggatagcgccgacgcccgcaacgtgctgtattga
DBGET
integrated database retrieval system
