Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_13790
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Entry
APT59_13790 CDS
T04267
Name
(GenBank) diguanylate cyclase response regulator
KO
K11444
two-component system, chemotaxis family, response regulator WspR [EC:
2.7.7.65
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por02020
Two-component system
por02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
por00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
APT59_13790
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
APT59_13790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
por02022
]
APT59_13790
Enzymes [BR:
por01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
APT59_13790
Two-component system [BR:
por02022
]
CheA family
WspE-WspRF (chemosensory)
APT59_13790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Response_reg
GGDEF_2
GRDA
Motif
Other DBs
NCBI-ProteinID:
ALZ85212
UniProt:
A0A0U4WLB1
LinkDB
All DBs
Position
3023993..3025015
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AA seq
340 aa
AA seq
DB search
MATDEGNALDSLTAPKVRLLLVDDQLIIIEALRRMVADQPDIELHYCLDANQAVNMALQL
KPTVVLQDLIMPEIDGLETVKRFRAEPALRDVPIVVLSSKEDPQVKAQSFATGANDYLVK
LPDKLELLARVRYHSEAHVLRAQRDEAFRFLRESQRQLAEANIQLQKLVAIDSLTGINNR
RHFDQTYEGEWLRARRNRQPLALLLCDVDHFKRYNDTYGHLSGDLCLKKVAAVLTEQLKR
PADLVARYGGEEFAMVLPETDAEGARKVAEACRAGVERLQVAHSGSDLGFVTISIGVGSI
QPQSGDDHEAFIEQTDQALYQAKAEGRNRVHLLPSPGKDA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggccacagacgagggtaacgccctggacagcctgaccgcccccaaggtgcgcctgctg
ctggtggatgatcagctgatcatcatcgaagccctgcgccggatggtcgcggatcagccc
gacatcgaactgcattactgcctggatgccaaccaggcggtcaacatggccctgcaactc
aagcccacggtggtcttgcaggacctgatcatgcccgagatcgacggcctggaaacggtc
aagcgcttccgtgccgagccggcgctgcgcgatgtccccatcgtggtgctctcgtccaag
gaagacccccaggtcaaggcgcagagcttcgccacgggcgccaacgactacctggtcaag
ctgcccgacaagctggaactgctggcgcgggtgcgctaccactccgaggcccatgtattg
cgggcccagcgcgacgaagcgttccgcttcctgcgcgaaagccaacgccagctcgccgag
gccaacatccagctgcaaaagctggtggccatcgacagcctcaccggcatcaacaaccgt
cgtcacttcgaccagacctacgaaggcgaatggctgcgtgcccggcgcaatcgccagccg
ctggccctgctgctgtgcgacgtcgaccacttcaagcgctacaacgacacctatggccat
ctcagcggcgacctctgcctgaagaaggtggccgcggtgctgaccgagcaactcaagcgc
ccggcggatctggtagcccgctacggtggcgaggaattcgccatggtgctgccggagacc
gacgccgaaggtgcgcgcaaggttgccgaagcctgccgcgcgggcgtcgagcgactgcag
gtcgcccactccggcagtgacctgggcttcgtcaccatttccatcggcgttggcagcatc
cagccgcaaagcggcgatgaccacgaagccttcatcgaacagaccgaccaggcgctgtat
caggccaaggccgaaggccgtaaccgggtgcatctgctgccaagccccggcaaggacgcc
tag
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