Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_15525
Help
Entry
APT59_15525 CDS
T04267
Name
(GenBank) isocitrate lyase
KO
K01637
isocitrate/methylisocitrate lyase [EC:
4.1.3.1
4.1.3.30
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por00630
Glyoxylate and dicarboxylate metabolism
por00640
Propanoate metabolism
por01100
Metabolic pathways
por01110
Biosynthesis of secondary metabolites
por01120
Microbial metabolism in diverse environments
por01200
Carbon metabolism
Module
por_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
por00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
APT59_15525
00640 Propanoate metabolism
APT59_15525
Enzymes [BR:
por01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
APT59_15525
4.1.3.30 methylisocitrate lyase
APT59_15525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ICL
PEP_mutase
Nuc_rec_co-act
Motif
Other DBs
NCBI-ProteinID:
ALZ85536
UniProt:
A0A0U4VQM8
LinkDB
All DBs
Position
3407014..3408609
Genome browser
AA seq
531 aa
AA seq
DB search
MSAYENDVQAIAALKTTAGKHWSAINPEYAARMRLQNRFKTGLDIARHCAAIMRRDMAAY
DADSSAYTQSLGCWHGFIGQQKLIAIKKHLGSTQGRYLYLSGWMIAALRSEFGPLPDQSM
HEKTSVPALIEELYTFLRQADARELAMLFRELDAARGADENAKAAAIQAKIDNYETHVVP
IIADIDAGFGNAEATYLLAKKMIEAGACCIQLENQVSDEKQCGHQDGKVTVPHEDFLAKI
NAVRYAFLELGVDEGIIVARTDSLGAGLTKQIAVSKQPGDLGDQYNSFLDCDEVDASQLG
NGEVLISRDGKLLRPKRLASGLFQFRTGSGVDRVVLDCITSLQNGADLLWIETEKPHVGQ
IKAMVDRIREVVPNAKLVYNNSPSFNWTLSFRQQVFDALQAEGKDVSAYDRAKLMSVDYD
DTELGRLADARIQSFQRDAAREAGIFHHLITLPTYHTAALSTDNLAKGYFAEEGMLAYVK
GVQRQEIRQGIACVKHQNMAGSDMGDDHKEYFAGEAALKAAGKDNTMNQFH
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttacgagaacgacgttcaggccatcgccgccctcaagaccactgccggcaaa
cactggagcgccatcaatccggaatatgccgcgcggatgcgtctgcagaatcgcttcaag
accggtctcgacatcgcccgccactgcgcggccatcatgcgccgggacatggccgcctac
gacgccgacagcagcgcctacacccagtcgctggggtgctggcacggcttcatcgggcag
cagaagctgatcgctatcaagaagcacctgggcagcacccagggtcgttacctctatctg
tccggctggatgatcgccgcgctgcgctcggaattcggcccgctgcccgatcagtccatg
cacgagaagaccagcgtgccggcgctgatcgaagagctctacaccttcctgcgccaggcc
gacgcccgcgagctggccatgctgttccgcgagctggatgccgcccgcggtgccgacgag
aacgccaaggccgccgccatccaggccaagatcgataactacgagacccacgtggtaccg
atcatcgccgacatcgacgccggctttggcaacgccgaggccacctacctgctggccaag
aagatgatcgaagccggggcctgctgcatccagctggaaaaccaggtctccgacgagaag
cagtgcggccaccaggacggcaaggtgacggtgccccacgaggacttcctggccaagatc
aacgcggtgcgctacgccttcctcgaactgggcgtggacgagggcatcatcgtcgcccgc
accgactccctgggcgctggcctgaccaagcagatcgccgtgagcaagcagccgggcgac
ctgggtgaccagtacaacagctttctcgactgcgacgaggtggacgccagccagttgggc
aacggcgaggtgctgatcagccgcgacggcaaactgctgcggcccaagcgcctggccagt
ggcctgttccagttccgcaccggcagcggcgtggaccgggtggtgctggactgcatcacc
tcactgcagaacggtgccgacctgctgtggatcgagaccgagaagccccacgtcggccag
atcaaggccatggtcgaccgcatccgtgaggtcgtgcccaacgccaagctggtctacaac
aacagcccgtcgttcaactggacgctgagcttccgtcagcaggtgttcgacgccttgcag
gccgagggcaaggacgtttccgcctacgaccgcgccaagctgatgagcgtggactacgac
gacaccgagctgggtcgcctggccgatgcacgtatccagagcttccagcgcgacgccgcg
cgtgaagcgggcatcttccaccacctgatcaccctgcccacctaccacaccgcggccctg
tccaccgacaacctggccaagggctacttcgccgaggagggcatgctggcctacgtcaag
ggcgtgcagcgccaggagatccgccagggcatcgcctgcgtcaagcaccagaacatggcc
ggctcggacatgggcgacgaccacaaggaatactttgccggcgaggccgccctcaaggcg
gcgggcaaggacaacaccatgaaccagttccattga
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_15545
Help
Entry
APT59_15545 CDS
T04267
Symbol
prpB
Name
(GenBank) 2-methylisocitrate lyase
KO
K03417
methylisocitrate lyase [EC:
4.1.3.30
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por00640
Propanoate metabolism
por01100
Metabolic pathways
por01120
Microbial metabolism in diverse environments
por01200
Carbon metabolism
Module
por_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
por00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
APT59_15545 (prpB)
Enzymes [BR:
por01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.30 methylisocitrate lyase
APT59_15545 (prpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP_mutase
ICL
Motif
Other DBs
NCBI-ProteinID:
ALZ85540
UniProt:
A0A0U4X270
LinkDB
All DBs
Position
complement(3411840..3412727)
Genome browser
AA seq
295 aa
AA seq
DB search
MPAVSPGQKFRAAVAAERPLQVVGTLNANHALLAKRAGFQAIYLSGGGVAAGSLGLPDLG
ISGLEDVLIDVRRITDVCDLPLLVDVDTGFGASAFNVARTTRALIKAGAAAMHIEDQVGA
KRCGHRPGKEIVSQQEMVDRIKAAVDARTDADFVIMARTDALAVEGLQAAIDRACACVEA
GADMIFPEAMTELPMYRQFAQAVGVPILANITEFGATPLFTTEELAGADVGLVLYPLSAF
RAANRAAENVYTAIRRDGSQQAVVDTMQTRAELYDRIDYHRYEDQLDRLFQQGKS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgtcagtcccggccagaaattccgcgccgccgtcgccgccgaacgcccgctg
caggtggtcggcaccctcaatgccaatcatgcgctgctagccaagcgcgccggcttccag
gccatctacctgtccggcggcggtgtcgcagccggctccctggggttgccggacctgggc
atcagcggtctggaagatgtgctcatcgacgtccgtcgcatcaccgatgtctgcgatctg
ccgttgctggtggatgtcgacaccggcttcggcgcctcggccttcaacgtggcccgcacc
acccgtgccctgatcaaggccggcgcggcggccatgcacatcgaggatcaggtcggcgcc
aagcgctgcggccatcgaccgggcaaggagatcgtcagccagcaggagatggtcgatcgc
atcaaggcggcggtggatgcccgcaccgacgcggacttcgtcatcatggcgcgcaccgat
gccctggccgtggaaggcctgcaggccgccatcgaccgcgcctgcgcctgtgtcgaggcc
ggcgcagacatgatctttcccgaggccatgaccgaactgcccatgtaccgccagttcgcc
caggcggtaggggtgccgatcctggccaacatcaccgagttcggcgccacgccgctgttc
accaccgaggagctggccggcgccgacgtcggcctggtgctctatccgctgtcggccttt
cgtgccgccaatcgcgccgccgaaaacgtctacaccgcgatccgtcgcgacggtagccag
caggcggtggtcgacaccatgcagacccgcgccgaactctacgaccgcatcgattaccac
cgttatgaggaccagctggatcgcctgttccagcaaggcaaatcctga
DBGET
integrated database retrieval system
