Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_15995
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Entry
APT59_15995 CDS
T04267
Name
(GenBank) porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por01501
beta-Lactam resistance
por02020
Two-component system
Module
por_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
por00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
APT59_15995
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
APT59_15995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
por02000
]
APT59_15995
01504 Antimicrobial resistance genes [BR:
por01504
]
APT59_15995
Transporters [BR:
por02000
]
Other transporters
Pores ion channels [TC:
1
]
APT59_15995
Antimicrobial resistance genes [BR:
por01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
APT59_15995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
ALZ85625
UniProt:
A0A0U4XVS8
LinkDB
All DBs
Position
complement(3507850..3509205)
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AA seq
451 aa
AA seq
DB search
MTLSLFSPFARQSVWLLGVPGLLLTGAALASQQSDAKGFVEDGDLTLLLRNYYYLRQNEG
DGHGAEARNSRDPRSWTQAFLLNYTSGFTQGTVGVGVDAYGYLGLKLDGGDGHANTPNMP
VDGDGSQRSEFSKGGAAVKLRVSNTVLKYGDQQPTAPVLAAGGNWLFPQTARGWSLVSQE
VDHLVLEGGHFTAATAPRTTGSDGGIFAGYAGVEAASASYAGGVYKFSDHFSASLYAGHF
EDVWDQYYGNLNYVLPLAAGRSLTLDANLYRTLDAGSAKAGSIANTAGSLAAAFQTGAHT
FTLIHQRIHGDQPFDYAVFGAPLPGSFGDSILLGNSMQFSDFNGPGERSWQVRYDLDMES
YGVPGLNLMVRHTRGSGIDGTRMAADSAYAGLYGDGDKEHETDLEAKYVLQDGPAKDLSF
RLRQAWHSGSQSTGGTVAETRLITEYPLNIL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgacgctatcgctgttttccccctttgcccgtcagagcgtctggctgctcggcgtgccc
ggtctgctcctcaccggtgccgccctggccagtcagcagtccgatgccaagggcttcgtc
gaagacggtgacctgaccctgctcttgcgcaactactactacctgcgccagaacgagggt
gacggccatggcgccgaggcccgcaacagccgcgacccgcgcagctggacccaggcgttc
ctgctcaactacacctcgggcttcacccagggcaccgtgggggtcggggtggacgcctat
ggctacctgggcctcaagctggatggcggcgacggccatgccaacaccccgaacatgccg
gtggacggcgacggcagccagcgcagcgaattcagcaagggcggcgcggcggtcaagctg
cgcgtttccaacaccgtgctcaagtacggcgaccagcaacccacggcgccggtactggcg
gcgggtggcaactggctgtttccccagaccgcacgcggttggagcctggtgagccaggag
gtcgatcacctggtgctggaaggcggccacttcaccgccgccacggcgccgcgcaccacc
ggctcggacggcggcatcttcgccggttacgcgggggtcgaggcagcctcggccagctat
gccgggggcgtctacaagttcagcgatcatttcagcgcctcgctctacgccgggcacttc
gaggacgtctgggaccagtactacggcaacctcaactatgtactgccgctggccgccggg
cggagtctgaccctcgacgccaacctctatcgcaccctggacgctggcagcgccaaggcc
ggcagcatcgccaacaccgccggctcgctggctgccgccttccagaccggcgcccatacc
ttcaccctgatccaccagcgcatccacggtgaccaacccttcgactacgcagtcttcggg
gcgccgctgccgggttccttcggtgattccatcctgctcggcaactcgatgcagttctcc
gacttcaatggtccgggcgagcgcagctggcaggtacgctacgacctggacatggagagc
tacggcgtaccggggctgaacctgatggtgcggcatacccgcggcagtggcatcgacggc
acccggatggcggcggactcggcctatgccgggctctatggcgatggcgacaaggagcac
gagacggatctggaggccaagtacgtcctgcaggacggcccggccaaggacctgagcttc
cgcctgcgccaggcctggcattccggcagtcagagcaccggcggcaccgtggccgagacg
cggctgatcaccgagtatccgctgaatattctctga
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