Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_16975
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Entry
APT59_16975 CDS
T04267
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
por03000
]
APT59_16975
Transcription factors [BR:
por03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
APT59_16975
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
DUF6528
Motif
Other DBs
NCBI-ProteinID:
ALZ85808
UniProt:
A0A0U4VRD5
LinkDB
All DBs
Position
3721773..3722429
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AA seq
218 aa
AA seq
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MTLLVPAHHAGQDKPAGRIRQKNEEAILSAAEEEFARHGFRGTSMNTIAQRVGLPKANLH
YYFTNKLGLYMAVLGNILELWDSTFNHLTVDDDPAEALSRYIRAKLEFSRRQPLASRIFA
MEIIGGGHCLYEYFDQDYQTWFRSRAAVFEAWIAAGKLDPVDPVHLIFMLWSSTQHYADF
ASQICQVTGRARLTRQDFDEAAQTLTHIILKGLGLKAS
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaccctactcgtacccgcgcaccatgctggccaggacaagccggccggacgcatccgg
cagaagaatgaggaggcgatcctgagcgcggcggaggaggaattcgcccgccatggcttc
aggggcaccagcatgaacaccatcgcgcaacgtgtcgggctgcccaaggccaatctccat
tactacttcaccaacaagctcggcctctatatggcggtgctgggcaatatcctcgagctc
tgggacagcaccttcaaccacctgaccgtcgatgacgatccggccgaggccctgagccgt
tatattcgcgccaagctggagttctcgcgacgccaaccgctggcctcgcggatcttcgcc
atggagatcatcggcggtggccactgcctgtacgagtatttcgatcaggactaccagacc
tggtttcgcagccgagcggcagtgttcgaggcctggatcgccgccggcaagctggatccg
gtggatccggtccatctgatctttatgctgtggagcagcacccagcactatgccgacttc
gccagtcagatctgtcaggtgacggggcgtgcgcgcctgacccgacaggatttcgacgag
gcggcccagaccctcacccatatcatcctcaagggactgggtctcaaggcatcatga
DBGET
integrated database retrieval system
