Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_17895
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Entry
APT59_17895 CDS
T04267
Name
(GenBank) transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
por00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
APT59_17895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
por02022
]
APT59_17895
02035 Bacterial motility proteins [BR:
por02035
]
APT59_17895
Two-component system [BR:
por02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
APT59_17895
Bacterial motility proteins [BR:
por02035
]
Pilus system
Twitching motility proteins
APT59_17895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
HTH_30
VpsR
AAA_19
AAA_16
HTH_23
AAA_22
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ALZ85979
UniProt:
A0A0U4VRY9
LinkDB
All DBs
Position
3927845..3929185
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AA seq
446 aa
AA seq
DB search
MARQKVLIVDDEPDIRELLEITLGRMKLDTASAKNITDARAILERESFDLCLTDMRLPDG
SGLELINFIQQRMPQLPVAMITAFGSLETAVQALKAGAFDYLTKPVDLPRLRELVGTALR
LSGPTPPAPGASETQLLGESPPMRALRGQIAKLARSQAPVYISGESGSGKERVARLIHEQ
GPRAGRPFVPVNCGAIPSELVESEFFGHRRGSFTGAIEDKQGLFQAAQGGTLFLDEVADL
PLPMQVKLLRAIQEKAVRPVGSQQEISLDVRILSATHRDLAAEVSAGTFRQDLYYRLNVI
ELQVPALRERREDIGALATHMLERLARDAGLAPATLGDDALARLKSYRFPGNVRELENML
ERAYTLCEGDVIRPADLRLADAPAATATGEASLANIANLEDHLESIERQLIMQALEETRW
NRTAAAERLGLSFRSMRYRLKKLGID
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcccgacagaaagtcctgatcgtcgacgatgaacccgatatccgcgaactcctggaa
atcaccctggggcggatgaagctcgacaccgccagcgccaagaacatcaccgacgcgcga
gccattctcgaacgggaaagcttcgacctctgcctgaccgacatgcgcctgccggatggc
tcgggccttgagctgatcaatttcatccagcagcggatgccgcaattgccggtggccatg
atcaccgccttcggcagcctggaaaccgccgttcaggccctcaaggccggcgccttcgac
tacctcaccaagccggtggacctgccgcgtctgcgcgagctggtgggcacggcgctgcgc
ctgtccggccctaccccgccagcacccggtgccagtgaaacccagctgctgggcgaatcc
ccgcccatgcgcgccttgcgtgggcagatcgccaagctcgcccgcagtcaggcgccggtc
tacatcagtggcgaatcgggcagcggcaaggagcgcgtggcacgcctgatccacgagcag
ggtccgcgcgcgggtcggcccttcgtgccggtcaactgtggcgccattccttccgagttg
gtggaaagcgaattcttcggacatcgcaggggcagcttcaccggcgccatcgaggacaag
cagggcctgttccaggccgcccagggcggcaccctgtttctcgacgaggtggccgatcta
ccgctgccgatgcaggtcaagctgttgcgcgccatccaggaaaaggccgtgcgcccagta
ggcagccagcaggaaatcagcctggacgtgcgcattctcagtgctacccacagggacctc
gccgccgaagtctccgccggcacctttcgccaggatctctactaccgcctcaacgtcatc
gagctgcaggtgcctgccctgcgcgaacgtcgcgaggatatcggcgccctggccacccac
atgctcgaacgcctggcacgggatgcggggctcgccccggctaccctcggcgacgatgcc
ctggccagactcaagagctatagattccccggcaacgtgcgcgaactggaaaacatgctg
gaacgggcctacaccctgtgtgaaggcgatgtcatccggccggccgatctgcgcctggcc
gatgcgccagcggccaccgctaccggcgaagccagcctggccaacatcgccaatctcgaa
gaccacctggaatccatcgagcgccagctgatcatgcaggcactcgaagagacccgctgg
aatcgcaccgccgccgcggagcgcctgggcctctccttccgttcgatgcgctaccgcctg
aaaaagcttggcatcgactga
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