Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_18285
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Entry
APT59_18285 CDS
T04267
Name
(GenBank) XRE family transcriptional regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por02020
Two-component system
por02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
por00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
APT59_18285
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APT59_18285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
por02022
]
APT59_18285
Two-component system [BR:
por02022
]
OmpR family
QseC-QseB (quorum sensing)
APT59_18285
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
ALZ86055
LinkDB
All DBs
Position
4009914..4010579
Genome browser
AA seq
221 aa
AA seq
DB search
MRVLLVEDDAALAQGIRMALRGEGYTLDWVADGLAAEHALALERFDLVLLDLGLPRLDGL
DLLRRLRSQPDSQVPVLVLTSRDAKADRIQGLDAGADDYLVKPCDLDELKARIRALIRRS
CGRAHPLLEHAGISLDPASQTVRYRGAEVVMTPMEYQLLHQLLLRPGAVITRERLSNALY
GWQEAASGNTLEVLIHNLRKKLDSGLIRTVRGVGYLLERQP
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgcgagtactgctggtggaagacgatgcggccctggcccagggtatccgcatggccctg
cgcggcgagggctatactctggactgggtggccgacggcctggccgccgagcacgccctg
gcgcttgagcgtttcgacctggtgctgctggacctgggcctgccgcgcctggacggcctc
gacctgctgcgccgtctgcgcagccagcctgacagtcaggtgccggtactggtgctcacc
tcccgcgacgccaaggccgatcgcatccagggcctggatgccggcgccgacgactacctg
gtcaagccgtgcgacctggacgaactcaaagcacgtatccgcgccctgatccgtcgcagc
tgcgggcgggcgcaccccttgctggagcacgccggcatcagcctcgatccggccagccag
acggtgcgctatcgcggcgccgaggtggtgatgacgcccatggagtaccagctgctgcac
cagttgctgttgcggccgggcgccgtcatcacccgcgagcggctgagcaacgccctctat
ggctggcaggaagcggcctcgggcaacaccctggaagtgctcatccacaatctgcgcaag
aagctcgacagcgggctgatccgcacggtgcgcggcgtgggctatctgctggagcgccag
ccgtga
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integrated database retrieval system
