Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_18840
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Entry
APT59_18840 CDS
T04267
Name
(GenBank) GntR family transcriptional regulator
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
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GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
E3_binding
HTH_36
Beta_elim_lyase
MarR_2
Fe_dep_repress
HTH_24
TrmB
HTH_11
RepL
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ALZ86156
LinkDB
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Position
complement(4139524..4141032)
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AA seq
502 aa
AA seq
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MVGGVAICMGRDPVRHRYSPDMNRYQLLADALGRRIEQGLYRPGERLPSVRALAQEHGVS
LATVQQAYRLLEDRGLVEPRPKSGYFVRLERRAIELPRVTRPARWPVEVSGWEPVRELMT
STPDSVRVQLGRGLPDTEAPTLAPLLAGMARLARRPGNAGLSYDSIQGVAALREQVARLQ
LDAGCVLTADDIVITSGAHEALATALRATCQEGDIVAVDSPTFHGVMQTLKGQGLKALEI
PTDPRIGISLPALELALEQWPVRAIQLTPSCNNPLGYCMPEANKRQLVALARKHDLAVIE
DDVYGDLLYGYPRARALKAFDEDDRVILCSSFSKTLAPGLRVGWVAPGRYAERILHLKYI
GTGCTAPQPQLAIAEFIAAGHYTVHVRRMRAQYQRNRDLMSAWVQRYFPAGTRVSQPQGS
FLLWVELPEACDSHRLNRELLAQSVQIACGSIFSASGKYRNCLRLNYAQAQRPGVEEGVR
RVGEAACRLLDEALPRSVAALV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggtaggtggcgtggccatctgtatggggcgcgatccggtccggcaccgctatagtccg
gacatgaatcgctatcagctgttggccgacgcgctcggccgccgtatcgaacagggcctc
tatcgaccgggcgaacgcctgccgtcggtacgggccctggcgcaggagcacggggtgagc
ctggctacggtgcaacaggcctatcggctgctggaggatcgcggcctggtcgagccacgg
cccaagtccggctatttcgtccgcctggaaagacgcgccatcgagttgccccgggtgacc
cgcccggcgcgctggccggtggaggtgtccggctgggagccggtgcgcgagctgatgacc
agcacccccgactcggtgcgagtgcaacttggccgcggcctgccggataccgaggcaccg
accctggcccccttgctcgccggcatggcacgcctggcgcggcggccaggcaatgccggg
ctgtcctacgacagcatccagggcgtggcggccttgcgcgaacaggtggcccggctgcag
ctggatgccggctgcgtgctcaccgccgatgacatcgtcatcaccagcggtgcccacgag
gccctggccacggccttgcgcgccacctgccaggagggcgacatcgtcgcggtggattcg
ccgaccttccacggggtgatgcagaccctcaagggccagggcctcaaggcgctggagatc
cccaccgatccgcgtatcggcatcagcctgccggcgctggaactggccctggagcagtgg
ccggtgcgcgccatccagctcacccccagctgcaacaaccccctgggctactgcatgccc
gaggccaacaagcgccagctggtggccctggcgcgcaagcacgacctagcggtgatcgaa
gacgacgtctacggcgatctgctctatggctatccgcgggcgcgggcgctcaaggccttt
gacgaagacgaccgggtgatcctctgcagttccttttccaagaccctggcccccgggctc
agggtcggttgggtggcacctgggcgctatgccgagcgcatcctgcacctcaagtacata
ggcactggctgcaccgccccccaaccgcagctggctatcgccgaattcatcgccgccggg
cactacaccgtccacgtccggcgcatgcgtgcccagtaccagcgcaatcgcgacctgatg
agcgcctgggtgcagcgctactttccggccggcacccgggtcagccagccccagggcagt
ttcctgctctgggtggaattgcccgaggcctgcgacagccacagactgaatcgcgagttg
ctcgcccagagcgtgcagatcgcctgtggcagcatcttttccgcctcgggcaagtaccgc
aactgcctgcgcctgaactatgcccaggcccagcgtccgggcgtggaggagggggtgcgg
cgcgtcggtgaagcggcgtgtcggctgctcgatgaggcgctgccgcggtcggtggcggcg
ctggtctag
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